BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026491
         (1691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   724   0.0  
ref|XP_003524908.1| PREDICTED: probable DNA primase large subuni...   688   0.0  
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2...   688   0.0  
ref|XP_004140536.1| PREDICTED: probable DNA primase large subuni...   684   0.0  
gb|AEL98887.1| DNA primase large subunit, partial [Silene latifo...   683   0.0  

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
            gi|297741936|emb|CBI33371.3| unnamed protein product
            [Vitis vinifera]
          Length = 452

 Score =  724 bits (1868), Expect = 0.0
 Identities = 354/444 (79%), Positives = 397/444 (89%), Gaps = 3/444 (0%)
 Frame = +1

Query: 112  MQVIRSQKKTLS-PEVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKA 288
            M++IRSQ+++    +VVSTLPLYRSAPPL+VRLEDFEL+AIDRLRVLKGISDGLSRGKK 
Sbjct: 1    MEIIRSQRRSSKVDDVVSTLPLYRSAPPLQVRLEDFELFAIDRLRVLKGISDGLSRGKKP 60

Query: 289  EDMEKLVSDLWRTNMLQQNTAEVTNKDIISHFALRLVYCRTDDLRKWFLSMETALFRYHF 468
            ++MEKLVSDLW+ NM     +E  NKDIISHF LRLVYCRT++LRKWFLSMETALFR+ F
Sbjct: 61   DEMEKLVSDLWKANMRHPQASEFVNKDIISHFVLRLVYCRTEELRKWFLSMETALFRHRF 120

Query: 469  KRESADAQRTVMAEFDLPYKAASNAELENVKDKLTQVARSIGHTAPNA--IFFKVPFEEV 642
            + E+ +AQR ++AEFD PYKA S+AE E+VK+KL QVARS G + P+A  I+FKVPFEEV
Sbjct: 121  RLETPEAQRVLLAEFDHPYKAVSHAEFESVKEKLGQVARSFGQSLPSADAIYFKVPFEEV 180

Query: 643  PELVAGRKVFIHKGYAYVAMYQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTP 822
            PELVAGR+VF+ KG+AYVAM QVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEK+RLTP
Sbjct: 181  PELVAGRRVFLQKGHAYVAMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKERLTP 240

Query: 823  IVEALSTRYLGPNYSQPKEYSEISLREIDKLANSSFPLCMRHLFGKLREDHHLKHGGRMQ 1002
            IVEALST YLGP+YSQP+E+ EIS+++ID++ANSSFPLCMRHLF KLREDHHLKHGGRMQ
Sbjct: 241  IVEALSTSYLGPDYSQPREFVEISIKDIDQVANSSFPLCMRHLFEKLREDHHLKHGGRMQ 300

Query: 1003 XXXXXXXXXXXXEDALAFWKAEFSHKVGTERFDKEYAYGIRHNYGKEGKRTDYTPYSCQK 1182
                        +DALAFWKAEFS KVG+ERFDKEYAY IRHNYGKEGKRTDYTPYSCQK
Sbjct: 301  LGLFLKGVGLKLDDALAFWKAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 360

Query: 1183 IISSTPGVGDHHGCPYRHFSEENLRSALGKMGVGGRSMEDVMDKVRNRHYQLACTLTFEA 1362
            IISSTPGVGDHHGCPYRHFSEENLR+ALGKMGVG R+MEDVMDKVRNRHYQLACTLTFEA
Sbjct: 361  IISSTPGVGDHHGCPYRHFSEENLRAALGKMGVGNRAMEDVMDKVRNRHYQLACTLTFEA 420

Query: 1363 VHGTSCDAGINHPNQYFSDSQKIL 1434
            VHG+SCDAGINHPNQYFSDSQKIL
Sbjct: 421  VHGSSCDAGINHPNQYFSDSQKIL 444


>ref|XP_003524908.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
          Length = 457

 Score =  688 bits (1775), Expect = 0.0
 Identities = 336/450 (74%), Positives = 386/450 (85%), Gaps = 8/450 (1%)
 Frame = +1

Query: 112  MQVIRSQKK----TLSPEVVS--TLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS 273
            M+++R Q +    + S E VS  T+PLYRSAPPLEVRLEDFE +AIDRLRVLKGISDG+S
Sbjct: 1    MEIVRPQNRRNLLSSSNEAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMS 60

Query: 274  RGKKAEDMEKLVSDLWRTNMLQQNTAEVTNKDIISHFALRLVYCRTDDLRKWFLSMETAL 453
            RGKKAE+ME LV DLW+ NM  Q   +V NKDIISHF LRLVYCRT+DLRKWFLSMETAL
Sbjct: 61   RGKKAEEMENLVKDLWKVNMRHQEATQVLNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 120

Query: 454  FRYHFKRESADAQRTVMAEFDLPYKAASNAELENVKDKLTQVARSIGHTAP--NAIFFKV 627
            FRY F+  +A+AQRTVM EFDLPY+A SN E E++K+KL QVARS+G  +P  +AIF+KV
Sbjct: 121  FRYRFRLLNAEAQRTVMEEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKV 180

Query: 628  PFEEVPELVAGRKVFIHKGYAYVAMYQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEK 807
            PFEEVPELVAGR+VFI++GYAYVAM Q+VSLV TQFRS LSKAL+LTNRKWTS+IREQEK
Sbjct: 181  PFEEVPELVAGRRVFINQGYAYVAMNQIVSLVATQFRSQLSKALILTNRKWTSSIREQEK 240

Query: 808  DRLTPIVEALSTRYLGPNYSQPKEYSEISLREIDKLANSSFPLCMRHLFGKLREDHHLKH 987
             RLTPIVEALS+ YLGP+YSQ +EY++ISL++ID++A SSFPLCMRHLF KL+EDHHLKH
Sbjct: 241  HRLTPIVEALSSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKH 300

Query: 988  GGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGTERFDKEYAYGIRHNYGKEGKRTDYTP 1167
            GGRMQ            +DALAFW++EFS KVG E+F+K+YAY IRHNYGKEGKRTDYTP
Sbjct: 301  GGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTP 360

Query: 1168 YSCQKIISSTPGVGDHHGCPYRHFSEENLRSALGKMGVGGRSMEDVMDKVRNRHYQLACT 1347
            YSCQKIISSTPG GDHHGCPYRHFSEENLR+AL  MGV  ++MEDVMDKVRNRHYQLACT
Sbjct: 361  YSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVNSQAMEDVMDKVRNRHYQLACT 420

Query: 1348 LTFEAVHGTSCDAGINHPNQYFSDSQKILQ 1437
            LTFEA+HG  CDAGINHPNQYFSDSQKIL+
Sbjct: 421  LTFEALHGMPCDAGINHPNQYFSDSQKILK 450


>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
            predicted protein [Populus trichocarpa]
          Length = 453

 Score =  688 bits (1775), Expect = 0.0
 Identities = 341/448 (76%), Positives = 380/448 (84%), Gaps = 6/448 (1%)
 Frame = +1

Query: 112  MQVIRSQKKTLSP---EVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGK 282
            M++++ Q K   P   +VVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKG+SDGLSRGK
Sbjct: 1    MEIVKPQWKKPPPSANDVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGVSDGLSRGK 60

Query: 283  KAEDMEKLVSDLWRTNMLQQNTAEVTNKDIISHFALRLVYCRTDDLRKWFLSMETALFRY 462
            + E+MEKLV+DLW+ NM     +EVTNKDIISHF LRLVYCRT++LRKWFLS E ALFRY
Sbjct: 61   RPEEMEKLVNDLWKANMRHPLPSEVTNKDIISHFVLRLVYCRTEELRKWFLSNEIALFRY 120

Query: 463  HFKRESADAQRTVMAEFDLPYKAASNAELENVKDKLTQVARSIGH---TAPNAIFFKVPF 633
             F+  S +AQR +MAEFDLPYK  + AE E VK+KL  VARS G    TA +AIF+KVPF
Sbjct: 121  RFRLLSPEAQRLLMAEFDLPYKPVTTAEFEGVKEKLHLVARSTGQLKPTASDAIFYKVPF 180

Query: 634  EEVPELVAGRKVFIHKGYAYVAMYQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDR 813
            EEVPELVAGR+VFI KGYAYVAM QVVSLVVTQFR  LSKALVLTNRKWTSTIREQEKDR
Sbjct: 181  EEVPELVAGRRVFICKGYAYVAMNQVVSLVVTQFRGLLSKALVLTNRKWTSTIREQEKDR 240

Query: 814  LTPIVEALSTRYLGPNYSQPKEYSEISLREIDKLANSSFPLCMRHLFGKLREDHHLKHGG 993
            LTPIVE L T YLGP+YSQPKE++E+S+++ID++A SSFPLCMRHLF KLREDHHLKHGG
Sbjct: 241  LTPIVETLCTSYLGPDYSQPKEFAEVSIKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGG 300

Query: 994  RMQXXXXXXXXXXXXEDALAFWKAEFSHKVGTERFDKEYAYGIRHNYGKEGKRTDYTPYS 1173
            RMQ            +DALAFWKAEFS KVG ERFDKEYAY IRHNYG+EGKRTDYTPYS
Sbjct: 301  RMQLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGREGKRTDYTPYS 360

Query: 1174 CQKIISSTPGVGDHHGCPYRHFSEENLRSALGKMGVGGRSMEDVMDKVRNRHYQLACTLT 1353
            CQKIISSTPGVGDHHGCPYRHFSEENLR+AL +MGV    ME+VMDKVRNRHYQLACTLT
Sbjct: 361  CQKIISSTPGVGDHHGCPYRHFSEENLRAALSRMGVNSGEMENVMDKVRNRHYQLACTLT 420

Query: 1354 FEAVHGTSCDAGINHPNQYFSDSQKILQ 1437
            FE++HG+S DAGINHPNQYFSDSQK  +
Sbjct: 421  FESIHGSSYDAGINHPNQYFSDSQKFFK 448


>ref|XP_004140536.1| PREDICTED: probable DNA primase large subunit-like [Cucumis sativus]
            gi|449521050|ref|XP_004167544.1| PREDICTED: LOW QUALITY
            PROTEIN: probable DNA primase large subunit-like [Cucumis
            sativus]
          Length = 452

 Score =  684 bits (1764), Expect = 0.0
 Identities = 330/445 (74%), Positives = 381/445 (85%), Gaps = 3/445 (0%)
 Frame = +1

Query: 112  MQVIRSQKKT-LSPEVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKA 288
            M+  RS +K+ +S    +TLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKK+
Sbjct: 1    MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 289  EDMEKLVSDLWRTNMLQQNTAEVTNKDIISHFALRLVYCRTDDLRKWFLSMETALFRYHF 468
            E+MEKLV +L +TNM     +EV NKDIISHF LRLVYCRT+DLRKWFLSMET LFR+ F
Sbjct: 61   EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 469  KRESADAQRTVMAEFDLPYKAASNAELENVKDKLTQVARSIGHTAPN--AIFFKVPFEEV 642
              E  ++Q+ V AE  L YKA SNAE E V+DKL QVAR IG  AP+  AI++KVP+EEV
Sbjct: 121  LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 643  PELVAGRKVFIHKGYAYVAMYQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTP 822
            PELVAGR+VF+HKGYAY+A+YQVVSLV TQFRS+LSKAL LTNRKWTSTIREQEKDRL P
Sbjct: 181  PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 240

Query: 823  IVEALSTRYLGPNYSQPKEYSEISLREIDKLANSSFPLCMRHLFGKLREDHHLKHGGRMQ 1002
            IVEAL T YLGP+YSQP+EY++IS++++D++A SSFPLCMRHLF KL+EDHHLKHGGRMQ
Sbjct: 241  IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 1003 XXXXXXXXXXXXEDALAFWKAEFSHKVGTERFDKEYAYGIRHNYGKEGKRTDYTPYSCQK 1182
                        +DALAFW+AEFS +VG ERFDKEYAY IRHNYGKEGKR DY+PYSCQK
Sbjct: 301  LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQK 360

Query: 1183 IISSTPGVGDHHGCPYRHFSEENLRSALGKMGVGGRSMEDVMDKVRNRHYQLACTLTFEA 1362
            +ISS+P VGDHHGCPYRHFSE+NLR+ALGKMGV  R+MED+MDKVRNRHYQLACTLTFE+
Sbjct: 361  VISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFES 420

Query: 1363 VHGTSCDAGINHPNQYFSDSQKILQ 1437
            +HG++CDAGINHPNQYF DSQK+LQ
Sbjct: 421  IHGSTCDAGINHPNQYFIDSQKVLQ 445


>gb|AEL98887.1| DNA primase large subunit, partial [Silene latifolia]
          Length = 450

 Score =  683 bits (1763), Expect = 0.0
 Identities = 331/445 (74%), Positives = 387/445 (86%), Gaps = 4/445 (0%)
 Frame = +1

Query: 115  QVIRSQKKTLS--PEVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKA 288
            +++RSQKK+ S   +VVS LPLYRS P LEVRLEDFEL+AIDRLRVLKGISDGLSRGKK 
Sbjct: 1    EIVRSQKKSSSIINDVVSDLPLYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRGKKP 60

Query: 289  EDMEKLVSDLWRTNMLQQNTAEVTNKDIISHFALRLVYCRTDDLRKWFLSMETALFRYHF 468
            ++ME LV+DLW+ +M    ++E  NKDIISHF LRLVYCRTD+LR WFLSMET LFRY F
Sbjct: 61   DEME-LVNDLWKAHMRHPQSSETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRF 119

Query: 469  KRESADAQRTVMAEFDLPYKAASNAELENVKDKLTQVARSIGH--TAPNAIFFKVPFEEV 642
            K +S DAQR +MAEF LPYKA SNAE E+VK+KLTQVARS+G   T+ +++F+KVPFEEV
Sbjct: 120  KLKSLDAQRALMAEFGLPYKAVSNAEFESVKEKLTQVARSMGQSLTSGDSVFYKVPFEEV 179

Query: 643  PELVAGRKVFIHKGYAYVAMYQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKDRLTP 822
            PELVAGR+V+IHKG+AYVA++QVVSLVVTQFRS+LSKAL+LTNRKWTS I +QEK+RLTP
Sbjct: 180  PELVAGRRVYIHKGHAYVAVHQVVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNRLTP 239

Query: 823  IVEALSTRYLGPNYSQPKEYSEISLREIDKLANSSFPLCMRHLFGKLREDHHLKHGGRMQ 1002
            I+EALST Y+GP+YS+PKEY E+SL+++D+LAN+SFPLCMRHLF KLREDHHLK+GGRMQ
Sbjct: 240  IIEALSTSYVGPDYSEPKEYGEVSLKDLDRLANNSFPLCMRHLFEKLREDHHLKYGGRMQ 299

Query: 1003 XXXXXXXXXXXXEDALAFWKAEFSHKVGTERFDKEYAYGIRHNYGKEGKRTDYTPYSCQK 1182
                        +DALAFWK+EFS KVG ERFDKEY+Y IRH+YGKEGKR DYTPYSCQK
Sbjct: 300  LGLFLKGVGLKLDDALAFWKSEFSKKVGPERFDKEYSYSIRHSYGKEGKRVDYTPYSCQK 359

Query: 1183 IISSTPGVGDHHGCPYRHFSEENLRSALGKMGVGGRSMEDVMDKVRNRHYQLACTLTFEA 1362
            +IS TPGVGDHHGCP+RHFS+ENLR+AL KMGV  R+  DVMDKV+NRHYQLACTLTFEA
Sbjct: 360  VISCTPGVGDHHGCPFRHFSDENLRAALNKMGVNSRATVDVMDKVKNRHYQLACTLTFEA 419

Query: 1363 VHGTSCDAGINHPNQYFSDSQKILQ 1437
            VHG +CD+GINHPNQYFSDSQKILQ
Sbjct: 420  VHGATCDSGINHPNQYFSDSQKILQ 444