BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026443
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37903.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   146   2e-33
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30

>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = -3

Query: 379 RTP*MKPPNLSCLVQAVTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKS 200
           RT   KP    CLV+A+  L  K KL EAV  LE L  +G+RL+SR +A+LLQHCA++++
Sbjct: 15  RTNPRKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRA 74

Query: 199 LKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNML 20
           L+EGK VHL+L+LTG K +P T LSNHLINMY KCG + EAR+VF+KMS RNLYSWNNML
Sbjct: 75  LREGKRVHLHLKLTGLK-RPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNML 133

Query: 19  SGYAK 5
           SGYAK
Sbjct: 134 SGYAK 138



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = -3

Query: 262 GIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDK 83
           GI+ N  + A +L  C   K +   + VH  + + GF    N +LS+ +++ Y KCG   
Sbjct: 187 GIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLS--NVVLSSSVLDAYVKCGLMG 244

Query: 82  EARQVFNKMSVRNLYSWNNMLSGYAK 5
           +AR++F++MS R++ +W  M+SGYAK
Sbjct: 245 DARKLFDEMSARDVLAWTTMVSGYAK 270



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -3

Query: 331 VTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGF 152
           ++  +  G   +A++    ++L  +R +    ++ L  CA+  SLK GK +H YL    F
Sbjct: 296 ISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINF 355

Query: 151 KHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVR-NLYSWNNMLSGYAK 5
           +  PNT++ + LI+MY KCGS    R+VF+ M  + ++  WN ++S  A+
Sbjct: 356 Q--PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQ 403


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/125 (63%), Positives = 97/125 (77%)
 Frame = -3

Query: 379 RTP*MKPPNLSCLVQAVTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKS 200
           RT   KP    CLV+A+  L  K KL EAV  LE L  +G+RL+SR +A+LLQHCA++++
Sbjct: 15  RTNPRKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRA 74

Query: 199 LKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNML 20
           L+EGK VHL+L+LTG K +P T LSNHLINMY KCG + EAR+VF+KMS RNLYSWNNML
Sbjct: 75  LREGKRVHLHLKLTGLK-RPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNML 133

Query: 19  SGYAK 5
           SGYAK
Sbjct: 134 SGYAK 138



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = -3

Query: 262 GIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDK 83
           GI+ N  + A +L  C   K +   + VH  + + GF    N +LS+ +++ Y KCG   
Sbjct: 187 GIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLS--NVVLSSSVLDAYVKCGLMG 244

Query: 82  EARQVFNKMSVRNLYSWNNMLSGYAK 5
           +AR++F++MS R++ +W  M+SGYAK
Sbjct: 245 DARKLFDEMSARDVLAWTTMVSGYAK 270



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -3

Query: 331 VTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGF 152
           ++  +  G   +A++    ++L  +R +    ++ L  CA+  SLK GK +H YL    F
Sbjct: 296 ISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINF 355

Query: 151 KHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVR-NLYSWNNMLSGYAK 5
           +  PNT++ + LI+MY KCGS    R+VF+ M  + ++  WN ++S  A+
Sbjct: 356 Q--PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQ 403


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/133 (57%), Positives = 96/133 (72%)
 Frame = -3

Query: 403 SGSTSHLNRTP*MKPPNLSCLVQAVTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLL 224
           + S  H NRT       + C+V+++  LSS+G+L +A+  L LL   GIRL S+ +A LL
Sbjct: 3   TSSKFHSNRTK-----RVPCIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLL 57

Query: 223 QHCANTKSLKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVRN 44
           Q CANTKSLK GKWVHL+L++TG K +PNT L+NHLINMY KCG    A +VF++MS RN
Sbjct: 58  QQCANTKSLKLGKWVHLHLKVTGLK-RPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRN 116

Query: 43  LYSWNNMLSGYAK 5
           LYSWN MLSGYAK
Sbjct: 117 LYSWNGMLSGYAK 129



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%)
 Frame = -3

Query: 262 GIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGFKHKPNTLLSNHLINMYFKCGSDK 83
           GI  N  + A LL  C   K L+  K  H  + + GF    N ++S+ +++ Y KC    
Sbjct: 178 GIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLS--NLVISSSVLDAYAKCSEMG 235

Query: 82  EARQVFNKMSVRNLYSWNNMLSGYAK 5
           +AR++F++M +R++ +W  M+SGYA+
Sbjct: 236 DARRLFDEMIIRDVLAWTTMVSGYAQ 261


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = -3

Query: 346 CLVQAVTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYL 167
           C+ Q++ DLSS+G+L EA+  L+ L  +GIRL +    +LL+ CA  K  K GK VHL+L
Sbjct: 29  CIAQSLLDLSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHL 88

Query: 166 RLTGFKHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNMLSGYAK 5
           + TGFK +P T+++NHLI MYF+CG D EAR+VF+KMSVRNLYSWN+ML+GYAK
Sbjct: 89  KHTGFK-RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAK 141



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/105 (30%), Positives = 58/105 (55%)
 Frame = -3

Query: 319 SSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGFKHKP 140
           + +G   EA+          +  N+ + A +L  C   K L+  K VH  + + GF    
Sbjct: 171 AKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLS-- 228

Query: 139 NTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNMLSGYAK 5
           N +LS+ +++ Y KCG  + AR +F++M V+++++W  ++SGYAK
Sbjct: 229 NLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/114 (57%), Positives = 88/114 (77%)
 Frame = -3

Query: 346 CLVQAVTDLSSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYL 167
           C+ Q++ DLSS+G+L EA+  L+ L  +G+RL +    +LL+ CA  K  K GK VHL+L
Sbjct: 29  CIAQSLLDLSSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHL 88

Query: 166 RLTGFKHKPNTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNMLSGYAK 5
           + TGFK +P T+++NHLI MYF+CG D EAR+VF+KMSVRNLYSWN+ML+GYAK
Sbjct: 89  KHTGFK-RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAK 141



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/105 (30%), Positives = 58/105 (55%)
 Frame = -3

Query: 319 SSKGKLKEAVDCLELLLLKGIRLNSRAIANLLQHCANTKSLKEGKWVHLYLRLTGFKHKP 140
           + +G   EA+          +  N+ + A +L  C   K L+  K VH  + + GF    
Sbjct: 171 AKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLS-- 228

Query: 139 NTLLSNHLINMYFKCGSDKEARQVFNKMSVRNLYSWNNMLSGYAK 5
           N +LS+ +++ Y KCG  + AR +F++M V+++++W  ++SGYAK
Sbjct: 229 NLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273