BLASTX nr result

ID: Cimicifuga21_contig00026428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026428
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...   282   3e-74
emb|CBI33563.3| unnamed protein product [Vitis vinifera]              282   3e-74
ref|XP_002302984.1| methionyl-trna formyltransferase [Populus tr...   281   5e-74
ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-...   276   2e-72
ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [...   276   2e-72

>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score =  282 bits (722), Expect = 3e-74
 Identities = 143/201 (71%), Positives = 169/201 (84%), Gaps = 5/201 (2%)
 Frame = -1

Query: 593 LRRFCSHITASSPTFN-----NPTAKKKQLVFMGSPQVAVLVLDQLLNASKAPNSSFEVA 429
           LRRF +    SS + +      P +K+KQLVF+GSPQV+  VLD L NAS AP+S FEVA
Sbjct: 7   LRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNASTAPDSMFEVA 66

Query: 428 AIVTQPPSRRSRGKHMLPSPVAEHALERGFMPDLIFTPERAGEEIFLSNLSALQPEVCIT 249
           AIVTQPPS R+RG+ ++PSPVA+HAL+RGF  DLIFTPE+AGEEIFLS+L ALQPE+CIT
Sbjct: 67  AIVTQPPSGRNRGRKVMPSPVAQHALDRGFPSDLIFTPEKAGEEIFLSSLRALQPELCIT 126

Query: 248 AAYGNILPSKFLKIPPLGTINIHPSMLPLYRGAAPVQRALQDGVKETGVSLVYTVRALDA 69
           AAYGNILP KFL+IPP+GT+NIHPS+LPLYRGAAPVQRALQDGVKETGVSL +TVRALDA
Sbjct: 127 AAYGNILPRKFLEIPPMGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDA 186

Query: 68  GPIIANERVDVHDHVKAPELL 6
           GP+IA ER +V D +KA +LL
Sbjct: 187 GPVIACERFEVDDQIKATDLL 207


>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  282 bits (722), Expect = 3e-74
 Identities = 143/201 (71%), Positives = 169/201 (84%), Gaps = 5/201 (2%)
 Frame = -1

Query: 593 LRRFCSHITASSPTFN-----NPTAKKKQLVFMGSPQVAVLVLDQLLNASKAPNSSFEVA 429
           LRRF +    SS + +      P +K+KQLVF+GSPQV+  VLD L NAS AP+S FEVA
Sbjct: 34  LRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNASTAPDSMFEVA 93

Query: 428 AIVTQPPSRRSRGKHMLPSPVAEHALERGFMPDLIFTPERAGEEIFLSNLSALQPEVCIT 249
           AIVTQPPS R+RG+ ++PSPVA+HAL+RGF  DLIFTPE+AGEEIFLS+L ALQPE+CIT
Sbjct: 94  AIVTQPPSGRNRGRKVMPSPVAQHALDRGFPSDLIFTPEKAGEEIFLSSLRALQPELCIT 153

Query: 248 AAYGNILPSKFLKIPPLGTINIHPSMLPLYRGAAPVQRALQDGVKETGVSLVYTVRALDA 69
           AAYGNILP KFL+IPP+GT+NIHPS+LPLYRGAAPVQRALQDGVKETGVSL +TVRALDA
Sbjct: 154 AAYGNILPRKFLEIPPMGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDA 213

Query: 68  GPIIANERVDVHDHVKAPELL 6
           GP+IA ER +V D +KA +LL
Sbjct: 214 GPVIACERFEVDDQIKATDLL 234


>ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa]
           gi|222844710|gb|EEE82257.1| methionyl-trna
           formyltransferase [Populus trichocarpa]
          Length = 356

 Score =  281 bits (720), Expect = 5e-74
 Identities = 142/196 (72%), Positives = 164/196 (83%), Gaps = 1/196 (0%)
 Frame = -1

Query: 590 RRFCSHITASSPTFNNPTA-KKKQLVFMGSPQVAVLVLDQLLNASKAPNSSFEVAAIVTQ 414
           R FC + T ++    + T+ KKK LVF+GSPQVA  VLD L NASKAPNS FEVAAIVTQ
Sbjct: 4   RFFCFNSTTTAVAAASSTSSKKKPLVFLGSPQVAATVLDALFNASKAPNSLFEVAAIVTQ 63

Query: 413 PPSRRSRGKHMLPSPVAEHALERGFMPDLIFTPERAGEEIFLSNLSALQPEVCITAAYGN 234
           PP+RR RGK ++PSPVAE AL+ GF  DLIFTPERAGE+ FLS L ALQPE+CITAAYGN
Sbjct: 64  PPARRDRGKKLMPSPVAEFALDTGFPSDLIFTPERAGEDTFLSTLRALQPELCITAAYGN 123

Query: 233 ILPSKFLKIPPLGTINIHPSMLPLYRGAAPVQRALQDGVKETGVSLVYTVRALDAGPIIA 54
           ILP+KFL IPP+GT+NIHPS+LPLYRGAAPVQRALQDG KETGVSL +TVRALDAGP+IA
Sbjct: 124 ILPTKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQDGAKETGVSLAFTVRALDAGPVIA 183

Query: 53  NERVDVHDHVKAPELL 6
            E ++V D +KAP+LL
Sbjct: 184 YETLEVDDQIKAPDLL 199


>ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-like [Cucumis sativus]
          Length = 368

 Score =  276 bits (706), Expect = 2e-72
 Identities = 136/195 (69%), Positives = 169/195 (86%)
 Frame = -1

Query: 590 RRFCSHITASSPTFNNPTAKKKQLVFMGSPQVAVLVLDQLLNASKAPNSSFEVAAIVTQP 411
           RRF    + SSP+  +  +KKK LVF+GSPQV+ +VLD LLNAS   +++FEVAAIVTQP
Sbjct: 8   RRFSCFHSPSSPS--SVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQP 65

Query: 410 PSRRSRGKHMLPSPVAEHALERGFMPDLIFTPERAGEEIFLSNLSALQPEVCITAAYGNI 231
           PSRR RG+ ++PSPVA++AL++GF  DLI TPE+AGE++FLS L AL+PE+CITAAYGNI
Sbjct: 66  PSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGEDMFLSTLKALEPELCITAAYGNI 125

Query: 230 LPSKFLKIPPLGTINIHPSMLPLYRGAAPVQRALQDGVKETGVSLVYTVRALDAGPIIAN 51
           LP+KFL IP LGT+NIHPS+LPLYRGAAPVQRALQDGVKETGVSL +TVRALDAGPIIA+
Sbjct: 126 LPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPIIAS 185

Query: 50  ERVDVHDHVKAPELL 6
           E+++V +H+KAP+LL
Sbjct: 186 EKLEVDEHIKAPDLL 200


>ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [Ricinus communis]
           gi|223532528|gb|EEF34317.1| methionyl-tRNA
           formyltransferase, putative [Ricinus communis]
          Length = 362

 Score =  276 bits (706), Expect = 2e-72
 Identities = 137/195 (70%), Positives = 165/195 (84%)
 Frame = -1

Query: 590 RRFCSHITASSPTFNNPTAKKKQLVFMGSPQVAVLVLDQLLNASKAPNSSFEVAAIVTQP 411
           R F S   A+ P  ++ T+KKK LVF+GSPQV+  VLD L NAS +PNS FEVAAIVTQP
Sbjct: 12  RCFNSASVAAVPCASS-TSKKKPLVFLGSPQVSTTVLDALFNASSSPNSIFEVAAIVTQP 70

Query: 410 PSRRSRGKHMLPSPVAEHALERGFMPDLIFTPERAGEEIFLSNLSALQPEVCITAAYGNI 231
           P+R+ RG+ ++PSP A++AL+RGF PDLIFTPERAGE+ FL +L  LQPE+CITAAYGNI
Sbjct: 71  PARKGRGRKLMPSPAAQYALDRGFPPDLIFTPERAGEDSFLCSLKELQPELCITAAYGNI 130

Query: 230 LPSKFLKIPPLGTINIHPSMLPLYRGAAPVQRALQDGVKETGVSLVYTVRALDAGPIIAN 51
           LP+KFL IP +G +NIHPS+LPLYRGAAPVQRALQDGVKETGVSL +TVRALDAGP+IA+
Sbjct: 131 LPTKFLNIPSMGIVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAH 190

Query: 50  ERVDVHDHVKAPELL 6
           ER+DV D +KAP+LL
Sbjct: 191 ERLDVDDQIKAPDLL 205


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