BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026378
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   363   5e-98
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   360   5e-97
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   357   3e-96
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         348   1e-93
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   346   8e-93

>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
            predicted protein [Populus trichocarpa]
          Length = 506

 Score =  363 bits (932), Expect = 5e-98
 Identities = 189/306 (61%), Positives = 219/306 (71%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1201 VCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYSTRPQYPIMLWKPATPVYPKLIQEAPEGL 1022
            VC H+EEKTGGKIIHRVGGV+YLFRGRNYNY TRPQYP+MLWKPATPVYPKLIQEAPEGL
Sbjct: 201  VCRHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPATPVYPKLIQEAPEGL 260

Query: 1021 TKFEADKLRIKGKDLLPICKLAKNGTYINLVNDVRNAFEGSSLVKVNCEGMHATDYKKLG 842
            TK +AD+ R KGK+LLPICKLAKNG YI LV DVR AFEGS LVKV+C+GM  +DYKKLG
Sbjct: 261  TKAQADEFRKKGKNLLPICKLAKNGVYITLVRDVRAAFEGSPLVKVDCKGMEPSDYKKLG 320

Query: 841  AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPDTPSSVSDIHPSNDGTPYASDGLGKLDD 662
            AKLK+LVPCVLLSFDDEQILMWRG+DWKSMYP+   S+S   P+       SD  GK DD
Sbjct: 321  AKLKDLVPCVLLSFDDEQILMWRGQDWKSMYPEARPSIS--FPAELDIASGSDDSGKSDD 378

Query: 661  GIQRPAAKMV-FMPKLVSLWKRXXXXXXXXXXXXXXLGPDELLEKVEAFVDTAQATEHSY 485
                  AK++   PK++ LWK               LGPD LL KVE F   +QATEHSY
Sbjct: 379  DCDNSDAKILSSSPKMMLLWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSY 438

Query: 484  PALILSPEDSGDSSKTDHKDGSEFDGNDGNDSDVDEDENYGGDLFEGTESSIPFGSLPVD 305
            PAL++S ED   +S +  +D S  + N   D    +DE Y  + FE  E+S P GSL +D
Sbjct: 439  PALVMSSEDGSSNSISTFEDDSHSE-NFSEDDMYSDDEYYDSESFEELETSAPPGSLSID 497

Query: 304  SIAEQL 287
             IAE+L
Sbjct: 498  LIAEKL 503


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
            gi|297739063|emb|CBI28552.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  360 bits (923), Expect = 5e-97
 Identities = 185/313 (59%), Positives = 222/313 (70%), Gaps = 5/313 (1%)
 Frame = -1

Query: 1201 VCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYSTRPQYPIMLWKPATPVYPKLIQEAPEGL 1022
            VCHH+EEKTGGKIIHRVGGV+YLFRGRNYNY TRPQYP+MLWKPA PVYPKLIQEAPEGL
Sbjct: 255  VCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGL 314

Query: 1021 TKFEADKLRIKGKDLLPICKLAKNGTYINLVNDVRNAFEGSSLVKVNCEGMHATDYKKLG 842
            TKFEAD+LR+KGK+L+PIC+L KNG YI+LV DVR+AFEGS LVK++C+GMHA+DYKK+G
Sbjct: 315  TKFEADELRMKGKNLIPICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIG 374

Query: 841  AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPDTPS----SVSDIHPSNDGTPYASDGLG 674
            AKLKELVPCVLLSFDDEQIL WRG  WKSMY   PS     V+D+    +G+        
Sbjct: 375  AKLKELVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGIPKSNHH 434

Query: 673  KLDDGIQRPAAKMVFMPKLVSLWKRXXXXXXXXXXXXXXLGPDELLEKVEAFVDTAQATE 494
            +LD         +   PK++SLWK               LGPD LL+ VE F   +QATE
Sbjct: 435  RLD------TKAVSASPKMMSLWKSAIESSKALLLDETGLGPDALLKVVEEFEGISQATE 488

Query: 493  HSYPALILSPEDSGDSSKTDHKD-GSEFDGNDGNDSDVDEDENYGGDLFEGTESSIPFGS 317
            HSYPAL++S ED    +K +++   SE    D   +D D+DE    +  E  ES +P GS
Sbjct: 489  HSYPALVMSSEDGTGGTKAEYEGYNSEDYSEDEMYNDDDDDEYLVNESLEEMESPVPLGS 548

Query: 316  LPVDSIAEQLGWE 278
            LPVD +A+QLG E
Sbjct: 549  LPVDLLAKQLGEE 561


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  357 bits (916), Expect = 3e-96
 Identities = 181/312 (58%), Positives = 220/312 (70%), Gaps = 4/312 (1%)
 Frame = -1

Query: 1201 VCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYSTRPQYPIMLWKPATPVYPKLIQEAPEGL 1022
            VCHH+EEKTGGKIIHRVGGV+YLFRGRNYNY TRPQYP+MLWKPA PVYPKLIQEAPEGL
Sbjct: 255  VCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGL 314

Query: 1021 TKFEADKLRIKGKDLLPICKLAKNGTYINLVNDVRNAFEGSSLVKVNCEGMHATDYKKLG 842
            TKFEAD+LR+KG +L+PIC+L KNG YI+LV DVR+AFEGS LVK++C+GMHA+DYKK+G
Sbjct: 315  TKFEADELRMKGXNLIPICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIG 374

Query: 841  AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPDTPS----SVSDIHPSNDGTPYASDGLG 674
            AKLKE VPCVLLSFDDEQIL WRG  WKSMY   PS     V+D+    +G+        
Sbjct: 375  AKLKESVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHH 434

Query: 673  KLDDGIQRPAAKMVFMPKLVSLWKRXXXXXXXXXXXXXXLGPDELLEKVEAFVDTAQATE 494
            +LD         +   PK++SLWK               LGPD LL+ VE F   +QATE
Sbjct: 435  RLD------TKAVSASPKMMSLWKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATE 488

Query: 493  HSYPALILSPEDSGDSSKTDHKDGSEFDGNDGNDSDVDEDENYGGDLFEGTESSIPFGSL 314
            HSYPAL++S ED    +K +H+  +  D ++    + D+DE    +  E  ES +P GSL
Sbjct: 489  HSYPALVMSSEDGTGGTKAEHEGYNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSL 548

Query: 313  PVDSIAEQLGWE 278
            PVD +A+QLG E
Sbjct: 549  PVDLLAKQLGEE 560


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  348 bits (894), Expect = 1e-93
 Identities = 183/309 (59%), Positives = 221/309 (71%), Gaps = 1/309 (0%)
 Frame = -1

Query: 1201 VCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYSTRPQYPIMLWKPATPVYPKLIQEAPEGL 1022
            +CHH+EEKTGGKIIHRVGGVLYLFRGRNYNY TRPQYP+MLWKPA PVYPKLIQEAPEGL
Sbjct: 301  ICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGL 360

Query: 1021 TKFEADKLRIKGKDLLPICKLAKNGTYINLVNDVRNAFEGSSLVKVNCEGMHATDYKKLG 842
            TK EA++LR+KGK+LLPICKLAKNG YI+LV+DVR+AFEGS LVK++C GMH +DYKKLG
Sbjct: 361  TKEEANELRMKGKNLLPICKLAKNGVYISLVDDVRHAFEGSILVKIDCTGMHESDYKKLG 420

Query: 841  AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPDTPSSVSDIHPSNDGTPYASDGLGKLDD 662
            AKLKELVPCVLLSFD+EQILMWRGKDWKS+  D  S+      S++ +  +S    +  D
Sbjct: 421  AKLKELVPCVLLSFDNEQILMWRGKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSD 480

Query: 661  GIQRPAAKMVFMPKLVSLWKRXXXXXXXXXXXXXXLGPDELLEKVEAFVDTAQATEHSYP 482
             +      +   PK+  LW+R              L PDELLE+VE F   +QATEHSYP
Sbjct: 481  LLNGNHHTIKTSPKMKLLWERAIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYP 540

Query: 481  ALILSPED-SGDSSKTDHKDGSEFDGNDGNDSDVDEDENYGGDLFEGTESSIPFGSLPVD 305
            A I S E+ S  +   + +D SE   N  +D DV  +E    DLF+  +  +P GSLPVD
Sbjct: 541  AFITSSEEVSSPADSPESQDHSE--ANYNSDDDVGREE----DLFDNVDPLVPLGSLPVD 594

Query: 304  SIAEQLGWE 278
             IA++L  E
Sbjct: 595  IIAKKLSSE 603


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
            chloroplastic-like [Cucumis sativus]
          Length = 602

 Score =  346 bits (887), Expect = 8e-93
 Identities = 184/309 (59%), Positives = 215/309 (69%), Gaps = 1/309 (0%)
 Frame = -1

Query: 1201 VCHHVEEKTGGKIIHRVGGVLYLFRGRNYNYSTRPQYPIMLWKPATPVYPKLIQEAPEGL 1022
            +CHH+EEKTGGKIIHRVGGVLYLFRGRNYNY TRPQYP+MLWKPA PVYPKLIQEAPEGL
Sbjct: 300  ICHHIEEKTGGKIIHRVGGVLYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGL 359

Query: 1021 TKFEADKLRIKGKDLLPICKLAKNGTYINLVNDVRNAFEGSSLVKVNCEGMHATDYKKLG 842
            TK EA+ LR+KGK+LLPICKLAKNG YI+LVNDVR+AFEGS LVK++C GMH +DYKKLG
Sbjct: 360  TKKEANVLRMKGKNLLPICKLAKNGVYISLVNDVRHAFEGSILVKIDCTGMHESDYKKLG 419

Query: 841  AKLKELVPCVLLSFDDEQILMWRGKDWKSMYPDTPSS-VSDIHPSNDGTPYASDGLGKLD 665
            AKLKELVPCVLLSFD+EQILMWRGKDWKS+  D  S+ +     SND      + L +  
Sbjct: 420  AKLKELVPCVLLSFDNEQILMWRGKDWKSIISDDRSAPLPSRASSNDSLGSPGESL-ENS 478

Query: 664  DGIQRPAAKMVFMPKLVSLWKRXXXXXXXXXXXXXXLGPDELLEKVEAFVDTAQATEHSY 485
            D +      +   PK+  LW+               L PD+LLEKVE F   +QATEHSY
Sbjct: 479  DLLHGNHHTIKTSPKMKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSY 538

Query: 484  PALILSPEDSGDSSKTDHKDGSEFDGNDGNDSDVDEDENYGGDLFEGTESSIPFGSLPVD 305
            PA I S ED   S     K     + N  +D DV  +E    DLF+  +  +P GSLPVD
Sbjct: 539  PAFITSSEDV-SSPDDSPKSQDHTEANYNSDDDVGREE----DLFDNADPLVPLGSLPVD 593

Query: 304  SIAEQLGWE 278
             IA++L  E
Sbjct: 594  IIAKKLSSE 602