BLASTX nr result

ID: Cimicifuga21_contig00026308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026308
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]    75   4e-11
emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]    69   3e-09
emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]    68   5e-09
emb|CAN77980.1| hypothetical protein VITISV_002624 [Vitis vinifera]    67   1e-08
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                65   3e-08

>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = +2

Query: 542  CDR*ITIAKTMSKA-NGKSRHKCLRYNFVKQLLIS*VNSLDCI*LELILANPLTMPLN*R 718
            CD    IAK  SK  NGK+RH CLR+N V QLL + V SL+ +  +L LA+ LT PLN +
Sbjct: 1012 CDSQAAIAKAKSKIFNGKNRHICLRHNIVWQLLETGVISLEFVRSKLNLADSLTKPLNKK 1071

Query: 719  QVVETSRGIGLLPI**DEIDGNPTY 793
             V ETSRG+GL+PI   +  GNPTY
Sbjct: 1072 LVEETSRGMGLMPITEVKSCGNPTY 1096


>emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]
          Length = 588

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = +2

Query: 542 CDR*ITIAKTMSKA-NGKSRHKCLRYNFVKQLLIS*VNSLDCI*LELILANPLTMPLN*R 718
           CD   TIAK  SK  NGK++H  L +N V QLL S V SL+ +  EL L NP T PLN +
Sbjct: 504 CDSQATIAKAKSKIFNGKNKHIRLSHNIVWQLLESRVISLEFVKSELNLVNPFTKPLNKK 563

Query: 719 QVVETSRGIGLLPI**DEIDGNPTY 793
            V ETSR +GL+PI   +   NPTY
Sbjct: 564 LVEETSREMGLMPIIEVKSGSNPTY 588


>emb|CAN61817.1| hypothetical protein VITISV_015154 [Vitis vinifera]
          Length = 2186

 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +2

Query: 539 HCDR*ITIAKTMSKA-NGKSRHKCLRYNFVKQLLIS*VNSLDCI*LELILANPLTMPLN* 715
           HCD    IAK  SK  NGK+RH  LRYN V+QL  + V SL+ +  +L L + LT PLN 
Sbjct: 240 HCDSQAAIAKAKSKIFNGKNRHIRLRYNIVRQLHETRVISLEFVRSKLNLTDSLTKPLNK 299

Query: 716 RQVVETSRGIGLLPI 760
           + V ETSRGIGL+PI
Sbjct: 300 KLVEETSRGIGLMPI 314


>emb|CAN77980.1| hypothetical protein VITISV_002624 [Vitis vinifera]
          Length = 605

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +2

Query: 539 HCDR*ITIAKTMSKA-NGKSRHKCLRYNFVKQLLIS*VNSLDCI*LELILANPLTMPLN* 715
           HCD    I K  SK  NG ++H  LR+N V+QLL + V SL+ + LEL L + LT PLN 
Sbjct: 143 HCDSQTAIVKXKSKIFNGNNKHIRLRHNIVRQLLETWVISLEFVRLELNLVDXLTKPLNK 202

Query: 716 RQVVETSRGIGLLPI 760
           + V ETSRG+GL+PI
Sbjct: 203 KLVEETSRGMGLMPI 217


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +2

Query: 539  HCDR*ITIAKTMSKA-NGKSRHKCLRYNFVKQLLIS*VNSLDCI*LELILANPLTMPLN* 715
            HCD    IA   +K+ NGK+RH  LR+N VKQLL S   S+D +  E  LA+PLT PL  
Sbjct: 1205 HCDCQSAIAIAKNKSYNGKNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGR 1264

Query: 716  RQVVETSRGIGLLPI 760
            + ++ETSRG+GL P+
Sbjct: 1265 KMILETSRGMGLKPL 1279


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