BLASTX nr result

ID: Cimicifuga21_contig00026289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026289
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187635.1| putative F-box protein [Arabidopsis thaliana] g...    55   8e-06

>ref|NP_187635.1| putative F-box protein [Arabidopsis thaliana]
           gi|75266243|sp|Q9SS35.1|FB137_ARATH RecName:
           Full=Putative F-box protein At3g10240
           gi|6056201|gb|AAF02818.1|AC009400_14 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641355|gb|AEE74876.1| putative F-box protein
           [Arabidopsis thaliana]
          Length = 389

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -1

Query: 214 NGLLCFVDYDRDYTMAVYNPATQQKLLLPKPSRTINDRPELFGLGFDPLSKKYKVL---Y 44
           NGL+CF +  R   + V+NP+T+Q L+LPKP+   ND      LG+DP+  K+KV+   +
Sbjct: 130 NGLICFQESAR---LIVWNPSTRQLLILPKPNGNSNDL--TIFLGYDPVEGKHKVMCMEF 184

Query: 43  WSNYPHCEIFTLG 5
            + Y  C + TLG
Sbjct: 185 SATYDTCRVLTLG 197


Top