BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026241
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...   228   1e-57
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   227   4e-57
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici...   223   8e-56
gb|AFK38264.1| unknown [Medicago truncatula]                          221   2e-55
ref|XP_002887286.1| hypothetical protein ARALYDRAFT_476144 [Arab...   220   5e-55

>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score =  228 bits (582), Expect = 1e-57
 Identities = 124/215 (57%), Positives = 156/215 (72%), Gaps = 2/215 (0%)
 Frame = -2

Query: 792 MSSISRFALRLSNGFSKDRIFTAPIASKSINLNWVSRNYSLPAKQEDEEELEMIDQRRLP 613
           M  +SR +  L N F+ + I ++ +A   +N N + RNY+ P++ E+EEE   IDQRRLP
Sbjct: 1   MRLVSRISHLLPNVFA-NTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVEIDQRRLP 59

Query: 612 SDYDPSKFDPTEHRSPPSDRVFRLVDEVAALTLLENAQFGEIIMKKLRMTARPVVGVMKR 433
           +DYDP+ FDPTEHRSPP+DRVFRLVDE++ LTL+E A+   I+MKKL MT  PV G MK 
Sbjct: 60  ADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMKP 119

Query: 432 G--DAAVXXXXXXXXXXXXXXXXXKTVFELKLEAYEASSKIKVIKEVRSFTDLGLKEAKD 259
           G    A                  KTV+ELKLE+YEAS+KIK+IKEVRS TDLGLKEAKD
Sbjct: 120 GAVGLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAKD 179

Query: 258 LVEKTPAVIKSGVSKEEGEQIIEKMKALGAKVVME 154
           LV+K P+V+K G+SKEEGEQI+EKMKALGAKV++E
Sbjct: 180 LVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214


>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  227 bits (578), Expect = 4e-57
 Identities = 131/222 (59%), Positives = 163/222 (73%), Gaps = 9/222 (4%)
 Frame = -2

Query: 792 MSSISRFALRLSNGFSKDRIFTAPIASKSINLNW---VSRNYSLPAKQ---EDEEELEMI 631
           MS ISR    L NGFS     T P  S  + LN+   +SR ++  A++   E+EEE+E I
Sbjct: 1   MSLISRLRHCLPNGFS-----TKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVE-I 54

Query: 630 DQRRLPSDYDPSKFDPTEHRSPPSDRVFRLVDEVAALTLLENAQFGEIIMKKLRMTARPV 451
           DQRRLP+DYDP+ FDPTEHRSPP++RVF+LV+E+A LTL+E ++ G IIMK+++MT  P 
Sbjct: 55  DQRRLPTDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPT 114

Query: 450 VGVMKRGDAAVXXXXXXXXXXXXXXXXXK---TVFELKLEAYEASSKIKVIKEVRSFTDL 280
           +GV+K G A +                 K   TVFELKLE++EA+SKIKVIKEVRSFTDL
Sbjct: 115 IGVLKGGAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDL 174

Query: 279 GLKEAKDLVEKTPAVIKSGVSKEEGEQIIEKMKALGAKVVME 154
           GLKEAKDLVEKTP+V+K GVSKEEGEQIIEKMKA+GAKVV+E
Sbjct: 175 GLKEAKDLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223526735|gb|EEF28965.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 301

 Score =  223 bits (567), Expect = 8e-56
 Identities = 122/190 (64%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
 Frame = -2

Query: 708 SINLNWV--SRNYSLPAKQEDEEELEM-IDQRRLPSDYDPSKFDPTEHRSPPSDRVFRLV 538
           S+N+N V  SR Y+  A++++EEE E+ IDQRRLP+DYDP+ FDPTEHRSPP++RVF+LV
Sbjct: 112 SMNVNGVLLSRGYAQAARKDEEEEEEVEIDQRRLPADYDPATFDPTEHRSPPTERVFKLV 171

Query: 537 DEVAALTLLENAQFGEIIMKKLRMTARPVVGVMKRGDAAVXXXXXXXXXXXXXXXXXK-- 364
           DEVA LTL+E A+   IIMKK  MT  P VGV+K G A +                    
Sbjct: 172 DEVAGLTLVEVAELSSIIMKKRGMTELPTVGVLKGGAAGLAGMAMKAPAAAAKEEKKPEK 231

Query: 363 TVFELKLEAYEASSKIKVIKEVRSFTDLGLKEAKDLVEKTPAVIKSGVSKEEGEQIIEKM 184
           TVFELKLE+YEA+SKIK+IKEVRSFTDLGLKEAKDLVEKTP+++K+GVSKEE EQIIEKM
Sbjct: 232 TVFELKLESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKM 291

Query: 183 KALGAKVVME 154
           KA+GAKVVME
Sbjct: 292 KAVGAKVVME 301


>gb|AFK38264.1| unknown [Medicago truncatula]
          Length = 216

 Score =  221 bits (563), Expect = 2e-55
 Identities = 122/216 (56%), Positives = 153/216 (70%), Gaps = 3/216 (1%)
 Frame = -2

Query: 792 MSSISRFALRLSNGFSKDRIFTAPIASKSINLNWVSRNYSLPAKQEDEEELEM--IDQRR 619
           MS + R   RL NGF +  ++ + I   +  LN  SRN+   A++E+EE++E   IDQR 
Sbjct: 1   MSLLLRIRHRLHNGFYRQPLYESTIGLNARKLNVFSRNFGQAARKEEEEDVEEVEIDQRS 60

Query: 618 LPSDYDPSKFDPTEHRSPPSDRVFRLVDEVAALTLLENAQFGEIIMKKLRMTARPVVGVM 439
           LP+D+DP+ FDPT +R PPS+RVFRLVDEVA+LTL E A+ G I+MKK+ +   P VG M
Sbjct: 61  LPADFDPATFDPTNNRGPPSERVFRLVDEVASLTLAEGAELGLILMKKMGIKEMPNVGYM 120

Query: 438 KRGDAAVXXXXXXXXXXXXXXXXXK-TVFELKLEAYEASSKIKVIKEVRSFTDLGLKEAK 262
           K G A +                 + TVFELKL ++EA+SKIKVIKEVR FTDLGLKEAK
Sbjct: 121 KAGSANLAGMATKTTTAAQEEVKPEKTVFELKLLSFEATSKIKVIKEVRGFTDLGLKEAK 180

Query: 261 DLVEKTPAVIKSGVSKEEGEQIIEKMKALGAKVVME 154
           D+VEKTP++IK GVSKEEGEQIIEKMKALGA VV+E
Sbjct: 181 DIVEKTPSIIKKGVSKEEGEQIIEKMKALGANVVLE 216


>ref|XP_002887286.1| hypothetical protein ARALYDRAFT_476144 [Arabidopsis lyrata subsp.
           lyrata] gi|297333127|gb|EFH63545.1| hypothetical protein
           ARALYDRAFT_476144 [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  220 bits (560), Expect = 5e-55
 Identities = 113/177 (63%), Positives = 139/177 (78%)
 Frame = -2

Query: 684 RNYSLPAKQEDEEELEMIDQRRLPSDYDPSKFDPTEHRSPPSDRVFRLVDEVAALTLLEN 505
           R+Y+ PAK EDEEE E  DQR+LP+DYDP+ FDPTEHRSPP+DRVFRLVDE+++LTL E 
Sbjct: 28  RSYTQPAKIEDEEEEEEFDQRKLPTDYDPATFDPTEHRSPPTDRVFRLVDEISSLTLSEI 87

Query: 504 AQFGEIIMKKLRMTARPVVGVMKRGDAAVXXXXXXXXXXXXXXXXXKTVFELKLEAYEAS 325
           ++ G+IIMKK  MT  P V VMK G                     KTVFE+KLE++EAS
Sbjct: 88  SELGKIIMKKKGMTELPTVAVMKPGAGGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEAS 147

Query: 324 SKIKVIKEVRSFTDLGLKEAKDLVEKTPAVIKSGVSKEEGEQIIEKMKALGAKVVME 154
           +KIK+IKE+RSFTDLGLKEAK LVEKTPA++K+G+SKEEGE+I+EK+KALGAKVV+E
Sbjct: 148 AKIKIIKELRSFTDLGLKEAKALVEKTPAILKAGLSKEEGEKILEKLKALGAKVVLE 204