BLASTX nr result

ID: Cimicifuga21_contig00026202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026202
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318824.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|ABK94994.1| unknown [Populus trichocarpa]                           64   2e-08
ref|XP_003634061.1| PREDICTED: uncharacterized protein LOC100254...    61   1e-07
emb|CBI31788.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN74035.1| hypothetical protein VITISV_023404 [Vitis vinifera]    61   1e-07

>ref|XP_002318824.1| predicted protein [Populus trichocarpa] gi|222859497|gb|EEE97044.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -1

Query: 502 RSKSFREHRKAHYDEYRKVKELQRKGSSLIEDEIDVDDEGKEERSNARAMDVEKGPPVNG 323
           RS +FREHR+AHYDE+RKVKEL+RKGS L ++E + D     E   A        PP NG
Sbjct: 108 RSSNFREHRRAHYDEFRKVKELRRKGSFLEDEEENGDGVRDIEIEGAATSHQNSSPPANG 167

Query: 322 V 320
           V
Sbjct: 168 V 168


>gb|ABK94994.1| unknown [Populus trichocarpa]
          Length = 168

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -1

Query: 502 RSKSFREHRKAHYDEYRKVKELQRKGSSLIEDEIDVDDEGKEERSNARAMDVEKGPPVNG 323
           RS +FREHR+AHYDE+RKVKEL+RKGS L ++E + D     E   A        PP NG
Sbjct: 108 RSSNFREHRRAHYDEFRKVKELRRKGSFLEDEEENGDGVRDIEIEGAATSHQNSSPPANG 167

Query: 322 V 320
           V
Sbjct: 168 V 168


>ref|XP_003634061.1| PREDICTED: uncharacterized protein LOC100254986 [Vitis vinifera]
           gi|359490298|ref|XP_002263168.2| PREDICTED:
           uncharacterized protein LOC100254986 isoform 2 [Vitis
           vinifera]
          Length = 179

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 13/71 (18%)
 Frame = -1

Query: 493 SFREHRKAHYDEYRKVKELQRKGSSLIEDEIDVDDEGKE-----ERSNARAMDVE----- 344
           SF EHR+AHYDE+RKVKEL+++G S +EDE D D+EGKE     + S+ARA   E     
Sbjct: 110 SFNEHRRAHYDEFRKVKELRKQG-SFMEDEADEDNEGKENGGRCDSSSARARSKEGSSTL 168

Query: 343 -KGP--PVNGV 320
            K P  P NGV
Sbjct: 169 PKKPSAPPNGV 179


>emb|CBI31788.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 13/71 (18%)
 Frame = -1

Query: 493 SFREHRKAHYDEYRKVKELQRKGSSLIEDEIDVDDEGKE-----ERSNARAMDVE----- 344
           SF EHR+AHYDE+RKVKEL+++G S +EDE D D+EGKE     + S+ARA   E     
Sbjct: 76  SFNEHRRAHYDEFRKVKELRKQG-SFMEDEADEDNEGKENGGRCDSSSARARSKEGSSTL 134

Query: 343 -KGP--PVNGV 320
            K P  P NGV
Sbjct: 135 PKKPSAPPNGV 145


>emb|CAN74035.1| hypothetical protein VITISV_023404 [Vitis vinifera]
          Length = 305

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 13/71 (18%)
 Frame = -1

Query: 493 SFREHRKAHYDEYRKVKELQRKGSSLIEDEIDVDDEGKE-----ERSNARAMDVE----- 344
           SF EHR+AHYDE+RKVKEL+++G S +EDE D D+EGKE     + S+ARA   E     
Sbjct: 236 SFNEHRRAHYDEFRKVKELRKQG-SFMEDEADEDNEGKENGGRCDSSSARARSKEGSSTL 294

Query: 343 -KGP--PVNGV 320
            K P  P NGV
Sbjct: 295 PKKPSAPPNGV 305


Top