BLASTX nr result
ID: Cimicifuga21_contig00026176
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00026176 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 emb|CBI32919.3| unnamed protein product [Vitis vinifera] 67 2e-09 ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 64 1e-08 ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 64 1e-08 >ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1| predicted protein [Populus trichocarpa] Length = 460 Score = 77.0 bits (188), Expect = 1e-12 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 1/90 (1%) Frame = -2 Query: 280 FMNFVDRALNLHDVSTINKFSLSCRETYDDTRVNAWICTAITRNVQELILHIH-FDQPFV 104 FM+FVDR L L S I +F LSC D +RV WI A+ RNV++L L + F+ FV Sbjct: 81 FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFV 140 Query: 103 FPGCLLNCESLTTLKIDFDKVCYINIPTSI 14 P CL NCE+LT L+I+ + + +P+SI Sbjct: 141 LPHCLFNCETLTELEINMPYI--LKLPSSI 168 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 67.0 bits (162), Expect = 2e-09 Identities = 33/75 (44%), Positives = 44/75 (58%) Frame = -2 Query: 280 FMNFVDRALNLHDVSTINKFSLSCRETYDDTRVNAWICTAITRNVQELILHIHFDQPFVF 101 F NFVD+ L +S I KF L C + D+ VN+WICTA+ RNVQEL L+ + P Sbjct: 75 FKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDLYFDTEYPIEL 134 Query: 100 PGCLLNCESLTTLKI 56 P C++L LK+ Sbjct: 135 PPKFFFCKTLVVLKL 149 >ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1| predicted protein [Populus trichocarpa] Length = 420 Score = 65.1 bits (157), Expect = 6e-09 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 3/95 (3%) Frame = -2 Query: 280 FMNFVDRALNLHDVSTINKFSLSCRETYDDTRVNAWICTAITRNVQELILHIH---FDQP 110 FMN V+R L L D S I KF+LSC D TR W+ A+ RNV+EL ++ + + Sbjct: 94 FMNSVERVLLLRDSSNIEKFTLSC-GIDDATRTRTWVSAAVNRNVKELCVNFYEGGESES 152 Query: 109 FVFPGCLLNCESLTTLKIDFDKVCYINIPTSICFP 5 FV P CL C +LT LKI V + + +SI P Sbjct: 153 FVSPLCLFTCATLTKLKITSHGV--LRLSSSISLP 185 >ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 443 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/81 (38%), Positives = 47/81 (58%) Frame = -2 Query: 292 VKTSFMNFVDRALNLHDVSTINKFSLSCRETYDDTRVNAWICTAITRNVQELILHIHFDQ 113 + TSFM+FVDR L L S ++KFSL + D R+ WI + R V +L LH++ + Sbjct: 66 ISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLES 125 Query: 112 PFVFPGCLLNCESLTTLKIDF 50 F+ P + C++L LK+ F Sbjct: 126 EFLLPSQVYLCKTLVWLKLRF 146 >ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName: Full=F-box/LRR-repeat protein At4g14103 gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 381 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/81 (38%), Positives = 47/81 (58%) Frame = -2 Query: 292 VKTSFMNFVDRALNLHDVSTINKFSLSCRETYDDTRVNAWICTAITRNVQELILHIHFDQ 113 + TSFM+FVDR L L S ++KFSL + D R+ WI + R V +L LH++ + Sbjct: 66 ISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLES 125 Query: 112 PFVFPGCLLNCESLTTLKIDF 50 F+ P + C++L LK+ F Sbjct: 126 EFLLPSQVYLCKTLVWLKLRF 146