BLASTX nr result

ID: Cimicifuga21_contig00026159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026159
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   118   3e-24
ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   117   5e-24
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              117   5e-24
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-23
ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-21

>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  118 bits (295), Expect = 3e-24
 Identities = 80/242 (33%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
 Frame = +2

Query: 116  EESCSLASIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVAL-EGENLPFVKTSPIWKYV 292
            + +CS    +NVVSP +    +  +     S    V +   L E   +PF+K+S IWK +
Sbjct: 455  QTNCSTDLRNNVVSPLSLSKRERKVENFKQSSVINVPEATELVEDLEMPFLKSSLIWKNI 514

Query: 293  DSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKL 472
            +S++VF  LPQ PHF PL+   E   E  AMG+M+ FA +        +DD +   E+ +
Sbjct: 515  ESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLRVDDGREVFESYM 574

Query: 473  NSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXX 652
              L ELE HGF V+ I  RLE+LL  K     L+ E KK                     
Sbjct: 575  EVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGMAEGKNEKIKLEEDID- 633

Query: 653  XXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAK 832
                   +EE ISQL+ +R   V  K  K S ++ L+     + E+I N + EF   AA 
Sbjct: 634  ------KIEERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEFENVAAA 687

Query: 833  PW 838
            PW
Sbjct: 688  PW 689


>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  117 bits (293), Expect = 5e-24
 Identities = 63/197 (31%), Positives = 105/197 (53%)
 Frame = +2

Query: 248  ENLPFVKTSPIWKYVDSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXX 427
            ++LPFVK+SPIW  +++++VF ++PQ PHFRPL    E   E  A+G MV F+ +     
Sbjct: 1025 QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 1084

Query: 428  XXXIDDPKSDIENKLNSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXX 607
                DDP+S   + L +L+ELE HGF+ +P+++R+ +L+  K  Q +L G  K+ +    
Sbjct: 1085 KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1144

Query: 608  XXXXXXXXXXXXXXXXXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKE 787
                                 ++++ + +L+ KR   V  K++K S I  L   +  + E
Sbjct: 1145 EHTHEKTKIDEEIY-------EIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNE 1197

Query: 788  EIQNSDAEFIRTAAKPW 838
             IQ++  +F R A  PW
Sbjct: 1198 SIQSARQDFERVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  117 bits (293), Expect = 5e-24
 Identities = 63/197 (31%), Positives = 105/197 (53%)
 Frame = +2

Query: 248  ENLPFVKTSPIWKYVDSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXX 427
            ++LPFVK+SPIW  +++++VF ++PQ PHFRPL    E   E  A+G MV F+ +     
Sbjct: 885  QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 944

Query: 428  XXXIDDPKSDIENKLNSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXX 607
                DDP+S   + L +L+ELE HGF+ +P+++R+ +L+  K  Q +L G  K+ +    
Sbjct: 945  KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1004

Query: 608  XXXXXXXXXXXXXXXXXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKE 787
                                 ++++ + +L+ KR   V  K++K S I  L   +  + E
Sbjct: 1005 EHTHEKTKIDEEIY-------EIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNE 1057

Query: 788  EIQNSDAEFIRTAAKPW 838
             IQ++  +F R A  PW
Sbjct: 1058 SIQSARQDFERVATSPW 1074


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  115 bits (287), Expect = 2e-23
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
 Frame = +2

Query: 137  SIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVALEGENLPFVKTSPIWKYVDSMKVFCK 316
            S   + S  ++   +  +A+  C++     D + +E + +PFVK SP+W  ++SM+VF  
Sbjct: 691  STGRIASGVSEAREKKVVAVQSCTVDPKSNDTM-VENQLVPFVKKSPVWNTIESMEVFQI 749

Query: 317  LPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKLNSLIELEA 496
            +PQ PHF PL +  E   E  A+G MV FA +         DD +S +E+ L SL++LE 
Sbjct: 750  IPQKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEK 809

Query: 497  HGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXXXXXXRRDL 676
            HGF++   R RL +LL  K  Q E+  E K  +                       +R L
Sbjct: 810  HGFDITVPRCRLNELLSIKDGQGEVINESKDAE--------------EKIRVHTDEKRKL 855

Query: 677  EESISQLKIK----RQNLVMEK---QAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAKP 835
            EE +S ++ K    ++ L + K     KG  I +++     I E I+N+   F++ A+ P
Sbjct: 856  EEKMSDIEKKITELQEELALTKAKMDVKGLDISKMQSHADAINERIKNARDHFVKVASAP 915

Query: 836  W 838
            W
Sbjct: 916  W 916


>ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|222861056|gb|EEE98598.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  109 bits (273), Expect = 1e-21
 Identities = 68/235 (28%), Positives = 113/235 (48%)
 Frame = +2

Query: 134 ASIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVALEGENLPFVKTSPIWKYVDSMKVFC 313
           +S     S  ++   +  +A+  C++     D + +E +++PFVK SP+W  ++SM+VF 
Sbjct: 41  SSTGRAASGGSEAREKQAVAVESCTIDAKGNDTL-VENQSVPFVKRSPVWNTIESMEVFR 99

Query: 314 KLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKLNSLIELE 493
            +PQ  HF PL +  E   E  A+G MV FA +         DD +S +E+ L SL++LE
Sbjct: 100 AIPQKLHFHPLTECKEEYREGSAIGIMVTFASLFDKITSLQFDDCRSILESTLESLLDLE 159

Query: 494 AHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXXXXXXRRD 673
            HGF++   R RL +LL  K  Q E+  E K  +                       R D
Sbjct: 160 KHGFDITVPRGRLNELLSIKDGQGEVLNESKDAE-------GKLRVHTDEKRKLEEKRND 212

Query: 674 LEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAKPW 838
           +E+ I++L+ +      +   K   + +L+     I E I+N+   F + A+ PW
Sbjct: 213 IEKKITELQEELALTKAKMGIKNLDLSKLQSHANAINERIKNARDHFGKVASAPW 267


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