BLASTX nr result
ID: Cimicifuga21_contig00026159
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00026159 (1082 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu... 118 3e-24 ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243... 117 5e-24 emb|CBI36980.3| unnamed protein product [Vitis vinifera] 117 5e-24 ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2... 115 2e-23 ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|2... 109 1e-21 >ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis] gi|223545236|gb|EEF46744.1| RNA binding protein, putative [Ricinus communis] Length = 689 Score = 118 bits (295), Expect = 3e-24 Identities = 80/242 (33%), Positives = 114/242 (47%), Gaps = 1/242 (0%) Frame = +2 Query: 116 EESCSLASIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVAL-EGENLPFVKTSPIWKYV 292 + +CS +NVVSP + + + S V + L E +PF+K+S IWK + Sbjct: 455 QTNCSTDLRNNVVSPLSLSKRERKVENFKQSSVINVPEATELVEDLEMPFLKSSLIWKNI 514 Query: 293 DSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKL 472 +S++VF LPQ PHF PL+ E E AMG+M+ FA + +DD + E+ + Sbjct: 515 ESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLRVDDGREVFESYM 574 Query: 473 NSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXX 652 L ELE HGF V+ I RLE+LL K L+ E KK Sbjct: 575 EVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGMAEGKNEKIKLEEDID- 633 Query: 653 XXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAK 832 +EE ISQL+ +R V K K S ++ L+ + E+I N + EF AA Sbjct: 634 ------KIEERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEFENVAAA 687 Query: 833 PW 838 PW Sbjct: 688 PW 689 >ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera] Length = 1214 Score = 117 bits (293), Expect = 5e-24 Identities = 63/197 (31%), Positives = 105/197 (53%) Frame = +2 Query: 248 ENLPFVKTSPIWKYVDSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXX 427 ++LPFVK+SPIW +++++VF ++PQ PHFRPL E E A+G MV F+ + Sbjct: 1025 QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 1084 Query: 428 XXXIDDPKSDIENKLNSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXX 607 DDP+S + L +L+ELE HGF+ +P+++R+ +L+ K Q +L G K+ + Sbjct: 1085 KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1144 Query: 608 XXXXXXXXXXXXXXXXXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKE 787 ++++ + +L+ KR V K++K S I L + + E Sbjct: 1145 EHTHEKTKIDEEIY-------EIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNE 1197 Query: 788 EIQNSDAEFIRTAAKPW 838 IQ++ +F R A PW Sbjct: 1198 SIQSARQDFERVATSPW 1214 >emb|CBI36980.3| unnamed protein product [Vitis vinifera] Length = 1074 Score = 117 bits (293), Expect = 5e-24 Identities = 63/197 (31%), Positives = 105/197 (53%) Frame = +2 Query: 248 ENLPFVKTSPIWKYVDSMKVFCKLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXX 427 ++LPFVK+SPIW +++++VF ++PQ PHFRPL E E A+G MV F+ + Sbjct: 885 QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 944 Query: 428 XXXIDDPKSDIENKLNSLIELEAHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXX 607 DDP+S + L +L+ELE HGF+ +P+++R+ +L+ K Q +L G K+ + Sbjct: 945 KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1004 Query: 608 XXXXXXXXXXXXXXXXXXXRRDLEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKE 787 ++++ + +L+ KR V K++K S I L + + E Sbjct: 1005 EHTHEKTKIDEEIY-------EIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNE 1057 Query: 788 EIQNSDAEFIRTAAKPW 838 IQ++ +F R A PW Sbjct: 1058 SIQSARQDFERVATSPW 1074 >ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1| predicted protein [Populus trichocarpa] Length = 919 Score = 115 bits (287), Expect = 2e-23 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 7/241 (2%) Frame = +2 Query: 137 SIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVALEGENLPFVKTSPIWKYVDSMKVFCK 316 S + S ++ + +A+ C++ D + +E + +PFVK SP+W ++SM+VF Sbjct: 691 STGRIASGVSEAREKKVVAVQSCTVDPKSNDTM-VENQLVPFVKKSPVWNTIESMEVFQI 749 Query: 317 LPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKLNSLIELEA 496 +PQ PHF PL + E E A+G MV FA + DD +S +E+ L SL++LE Sbjct: 750 IPQKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEK 809 Query: 497 HGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXXXXXXRRDL 676 HGF++ R RL +LL K Q E+ E K + +R L Sbjct: 810 HGFDITVPRCRLNELLSIKDGQGEVINESKDAE--------------EKIRVHTDEKRKL 855 Query: 677 EESISQLKIK----RQNLVMEK---QAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAKP 835 EE +S ++ K ++ L + K KG I +++ I E I+N+ F++ A+ P Sbjct: 856 EEKMSDIEKKITELQEELALTKAKMDVKGLDISKMQSHADAINERIKNARDHFVKVASAP 915 Query: 836 W 838 W Sbjct: 916 W 916 >ref|XP_002320283.1| predicted protein [Populus trichocarpa] gi|222861056|gb|EEE98598.1| predicted protein [Populus trichocarpa] Length = 270 Score = 109 bits (273), Expect = 1e-21 Identities = 68/235 (28%), Positives = 113/235 (48%) Frame = +2 Query: 134 ASIDNVVSPNNQLASQSDMAIIPCSMQGAVFDKVALEGENLPFVKTSPIWKYVDSMKVFC 313 +S S ++ + +A+ C++ D + +E +++PFVK SP+W ++SM+VF Sbjct: 41 SSTGRAASGGSEAREKQAVAVESCTIDAKGNDTL-VENQSVPFVKRSPVWNTIESMEVFR 99 Query: 314 KLPQHPHFRPLLQKNELLLESQAMGYMVGFAEVXXXXXXXXIDDPKSDIENKLNSLIELE 493 +PQ HF PL + E E A+G MV FA + DD +S +E+ L SL++LE Sbjct: 100 AIPQKLHFHPLTECKEEYREGSAIGIMVTFASLFDKITSLQFDDCRSILESTLESLLDLE 159 Query: 494 AHGFNVQPIRARLEQLLQFKGSQVELDGELKKFQXXXXXXXXXXXXXXXXXXXXXXXRRD 673 HGF++ R RL +LL K Q E+ E K + R D Sbjct: 160 KHGFDITVPRGRLNELLSIKDGQGEVLNESKDAE-------GKLRVHTDEKRKLEEKRND 212 Query: 674 LEESISQLKIKRQNLVMEKQAKGSSIVELEKRLQVIKEEIQNSDAEFIRTAAKPW 838 +E+ I++L+ + + K + +L+ I E I+N+ F + A+ PW Sbjct: 213 IEKKITELQEELALTKAKMGIKNLDLSKLQSHANAINERIKNARDHFGKVASAPW 267