BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026050
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   195   7e-48
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   189   4e-46
ref|XP_004138727.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   189   4e-46
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              185   8e-45
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   185   8e-45

>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  195 bits (495), Expect = 7e-48
 Identities = 92/141 (65%), Positives = 110/141 (78%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSVKKEFKHSFENLGDGFQQLTEDEKNTL 188
            E EVVTGH+WSMPK NSRKQGELKE+LKQ+YHS+KKEF+  FE +   F+QLTEDEKN L
Sbjct: 1068 EEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLL 1127

Query: 189  YEQKASAWYQVTYHPQWVAKFLELKEPEAEEDDDRATQLLLSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQV YHP+WV K +EL+EP+A          +LSF WI  +YL RIKIRCRG
Sbjct: 1128 YEQKASAWYQVAYHPKWVNKSMELQEPDA-----AGCASMLSFAWIAADYLARIKIRCRG 1182

Query: 369  TKDLDTRKPINSLAQYLSERI 431
               +DT KP+NSL +YL++RI
Sbjct: 1183 FDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  189 bits (480), Expect = 4e-46
 Identities = 91/143 (63%), Positives = 109/143 (76%)
 Frame = +3

Query: 3    NGEAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSVKKEFKHSFENLGDGFQQLTEDEKN 182
            N E E+VTGH+WSMPKY SRKQGELKEKLK +Y ++KK+F+  FENLG  F+QLT DE+N
Sbjct: 1060 NREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERN 1119

Query: 183  TLYEQKASAWYQVTYHPQWVAKFLELKEPEAEEDDDRATQLLLSFGWIPVEYLVRIKIRC 362
             LYE+KASAWYQV YHP W+ K LEL+EP+A E        +LSF WI  +YL RIKI+C
Sbjct: 1120 ALYEKKASAWYQVAYHPTWLKKSLELREPDAPE-----AVPMLSFPWIAADYLARIKIKC 1174

Query: 363  RGTKDLDTRKPINSLAQYLSERI 431
            R TK  D  KPINSLA YLS+R+
Sbjct: 1175 RRTKSFDPTKPINSLASYLSDRM 1197


>ref|XP_004138727.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  189 bits (480), Expect = 4e-46
 Identities = 91/143 (63%), Positives = 109/143 (76%)
 Frame = +3

Query: 3    NGEAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSVKKEFKHSFENLGDGFQQLTEDEKN 182
            N E E+VTGH+WSMPKY SRKQGELKEKLK +Y ++KK+F+  FENLG  F+QLT DE+N
Sbjct: 1060 NREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERN 1119

Query: 183  TLYEQKASAWYQVTYHPQWVAKFLELKEPEAEEDDDRATQLLLSFGWIPVEYLVRIKIRC 362
             LYE+KASAWYQV YHP W+ K LEL+EP+A E        +LSF WI  +YL RIKI+C
Sbjct: 1120 ALYEKKASAWYQVAYHPTWLKKSLELREPDAPE-----AVPMLSFPWIAADYLARIKIKC 1174

Query: 363  RGTKDLDTRKPINSLAQYLSERI 431
            R TK  D  KPINSLA YLS+R+
Sbjct: 1175 RRTKSFDPTKPINSLASYLSDRM 1197


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  185 bits (469), Expect = 8e-45
 Identities = 90/141 (63%), Positives = 108/141 (76%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSVKKEFKHSFENLGDGFQQLTEDEKNTL 188
            E EVVTGHVWSMPKY SRKQGEL E+LK AY S+KKEF+  FE +   F QLT+DEKN L
Sbjct: 899  EEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRL 958

Query: 189  YEQKASAWYQVTYHPQWVAKFLELKEPEAEEDDDRATQLLLSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQVTYHP WV K LEL+ P    D+    +++LSF WI  +YL RIKIR +G
Sbjct: 959  YEQKASAWYQVTYHPTWVKKSLELQNP----DEVFGERVMLSFAWITADYLARIKIRRKG 1014

Query: 369  TKDLDTRKPINSLAQYLSERI 431
            T ++D+ KPINSLA++L +RI
Sbjct: 1015 TGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  185 bits (469), Expect = 8e-45
 Identities = 90/141 (63%), Positives = 108/141 (76%)
 Frame = +3

Query: 9    EAEVVTGHVWSMPKYNSRKQGELKEKLKQAYHSVKKEFKHSFENLGDGFQQLTEDEKNTL 188
            E EVVTGHVWSMPKY SRKQGEL E+LK AY S+KKEF+  FE +   F QLT+DEKN L
Sbjct: 1061 EEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRL 1120

Query: 189  YEQKASAWYQVTYHPQWVAKFLELKEPEAEEDDDRATQLLLSFGWIPVEYLVRIKIRCRG 368
            YEQKASAWYQVTYHP WV K LEL+ P    D+    +++LSF WI  +YL RIKIR +G
Sbjct: 1121 YEQKASAWYQVTYHPTWVKKSLELQNP----DEVFGERVMLSFAWITADYLARIKIRRKG 1176

Query: 369  TKDLDTRKPINSLAQYLSERI 431
            T ++D+ KPINSLA++L +RI
Sbjct: 1177 TGNVDSSKPINSLARFLVDRI 1197