BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026049
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   152   2e-35
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   152   2e-35
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...   148   4e-34
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   148   4e-34
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/81 (88%), Positives = 79/81 (97%)
 Frame = +2

Query: 2    IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
            IAPIEAL+KERY DWERKFG+GLG+RVVELT ETATDLKLLE+GQVIIS+PEKWDALSRR
Sbjct: 1411 IAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRR 1470

Query: 182  WKQRKHIQQISLFIIDELHLI 244
            WKQRKH+QQ+SLFIIDELHLI
Sbjct: 1471 WKQRKHVQQVSLFIIDELHLI 1491



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/81 (32%), Positives = 51/81 (62%)
 Frame = +2

Query: 2   IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
           +AP++AL  E   +   +  +   V+V EL+ + +   + +E+ Q+I+++PEKWD ++R+
Sbjct: 572 VAPMKALVAEVVGNLSNRL-QHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRK 630

Query: 182 WKQRKHIQQISLFIIDELHLI 244
              R + Q + L I+DE+HL+
Sbjct: 631 SGDRTYTQLVKLLIVDEIHLL 651


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/81 (88%), Positives = 79/81 (97%)
 Frame = +2

Query: 2    IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
            IAPIEAL+KERY DWERKFG+GLG+RVVELT ETATDLKLLE+GQVIIS+PEKWDALSRR
Sbjct: 1378 IAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRR 1437

Query: 182  WKQRKHIQQISLFIIDELHLI 244
            WKQRKH+QQ+SLFIIDELHLI
Sbjct: 1438 WKQRKHVQQVSLFIIDELHLI 1458



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/81 (32%), Positives = 51/81 (62%)
 Frame = +2

Query: 2   IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
           +AP++AL  E   +   +  +   V+V EL+ + +   + +E+ Q+I+++PEKWD ++R+
Sbjct: 539 VAPMKALVAEVVGNLSNRL-QHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRK 597

Query: 182 WKQRKHIQQISLFIIDELHLI 244
              R + Q + L I+DE+HL+
Sbjct: 598 SGDRTYTQLVKLLIVDEIHLL 618


>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Cucumis sativus]
          Length = 2175

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/81 (83%), Positives = 79/81 (97%)
 Frame = +2

Query: 2    IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
            IAPIE+L+KERY DW++KFGKGLG+RVVELT ETATDLKLLE+GQ+IIS+PEKWDALSRR
Sbjct: 1409 IAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALSRR 1468

Query: 182  WKQRKHIQQISLFIIDELHLI 244
            WKQRK++QQ+SLFIIDELHLI
Sbjct: 1469 WKQRKYVQQVSLFIIDELHLI 1489



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 51/81 (62%)
 Frame = +2

Query: 2   IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
           +AP++AL  E   +   +  +  GV+V EL+ +     + +++ Q+I+++PEKWD ++R+
Sbjct: 570 VAPMKALVAEVVGNLSNRL-QDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRK 628

Query: 182 WKQRKHIQQISLFIIDELHLI 244
              R + Q + L IIDE+HL+
Sbjct: 629 SGDRTYTQLVKLLIIDEIHLL 649


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Cucumis sativus]
          Length = 2175

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/81 (83%), Positives = 79/81 (97%)
 Frame = +2

Query: 2    IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
            IAPIE+L+KERY DW++KFGKGLG+RVVELT ETATDLKLLE+GQ+IIS+PEKWDALSRR
Sbjct: 1409 IAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALSRR 1468

Query: 182  WKQRKHIQQISLFIIDELHLI 244
            WKQRK++QQ+SLFIIDELHLI
Sbjct: 1469 WKQRKYVQQVSLFIIDELHLI 1489



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 51/81 (62%)
 Frame = +2

Query: 2   IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
           +AP++AL  E   +   +  +  GV+V EL+ +     + +++ Q+I+++PEKWD ++R+
Sbjct: 570 VAPMKALVAEVVGNLSNRL-QDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRK 628

Query: 182 WKQRKHIQQISLFIIDELHLI 244
              R + Q + L IIDE+HL+
Sbjct: 629 SGDRTYTQLVKLLIIDEIHLL 649


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/81 (83%), Positives = 79/81 (97%)
 Frame = +2

Query: 2    IAPIEALSKERYHDWERKFGKGLGVRVVELTDETATDLKLLEKGQVIISSPEKWDALSRR 181
            IAP+EA+++ERY DWERKFG+GLG+RVVELT ETATDLKLLEKGQ+IIS+PEKWDALSRR
Sbjct: 1388 IAPLEAIARERYRDWERKFGRGLGMRVVELTGETATDLKLLEKGQIIISTPEKWDALSRR 1447

Query: 182  WKQRKHIQQISLFIIDELHLI 244
            WKQRK++QQ+SLFIIDELHLI
Sbjct: 1448 WKQRKYVQQVSLFIIDELHLI 1468