BLASTX nr result

ID: Cimicifuga21_contig00026040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00026040
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...    96   2e-18
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...    93   2e-17
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...    93   2e-17
gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis a...    93   2e-17

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = +2

Query: 2   VANSLNMVLRIIYSAVFIRRYFQGASSFSFRCCLPSGWVVLLFSGVATFISERIFLDRLN 181
           +ANSLNM+LRIIYSAVFI+ YFQ +S+FSF  CLPSGW VLLFSGV T ISE++FLD  N
Sbjct: 375 LANSLNMILRIIYSAVFIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHEN 434

Query: 182 FWSSMSIH 205
           FW +  IH
Sbjct: 435 FWPTFLIH 442


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/68 (66%), Positives = 53/68 (77%)
 Frame = +2

Query: 2   VANSLNMVLRIIYSAVFIRRYFQGASSFSFRCCLPSGWVVLLFSGVATFISERIFLDRLN 181
           +ANSLNM LRI+YSA+FI+ YFQG+SSFSF  CLPSGW+ LL SGV T ISE + LDR N
Sbjct: 417 MANSLNMTLRILYSAIFIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDN 476

Query: 182 FWSSMSIH 205
           F  S  +H
Sbjct: 477 FXPSFILH 484


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +2

Query: 5   ANSLNMVLRIIYSAVFIRRYFQGASSFSFRCCLPSGWVVLLFSGVATFISERIFLDRLNF 184
           ANS+NM+LRI YSA+FI+ YF+  S FSF  CLPSGW+ LL SGV T ISER+FLD+  F
Sbjct: 429 ANSINMILRITYSAIFIKGYFKNPS-FSFNSCLPSGWIFLLLSGVLTLISERLFLDQQKF 487

Query: 185 WSSMSIH 205
           WS+ S+H
Sbjct: 488 WSTFSLH 494


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = +2

Query: 2   VANSLNMVLRIIYSAVFIRRYFQGASSFSFRCCLPSGWVVLLFSGVATFISERIFLDRLN 181
           +ANSLNM+ RIIYS  FI+RYFQG SSFSFR C P GW +L+ S + T ISE+  LDR N
Sbjct: 375 MANSLNMIFRIIYSGKFIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKN 434

Query: 182 FWSSMSIH 205
           FW +  +H
Sbjct: 435 FWETFPLH 442


>gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = +2

Query: 2   VANSLNMVLRIIYSAVFIRRYFQGASSFSFRCCLPSGWVVLLFSGVATFISERIFLDRLN 181
           +ANSLNM+ RIIYS  FI+RYFQG SSFSFR C P GW +L+ S + T ISE+  LDR N
Sbjct: 375 MANSLNMIFRIIYSGKFIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKN 434

Query: 182 FWSSMSIH 205
           FW +  +H
Sbjct: 435 FWETFPLH 442


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