BLASTX nr result

ID: Cimicifuga21_contig00025980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025980
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761751.1| predicted protein [Physcomitrella patens sub...   159   5e-37
ref|XP_003571005.1| PREDICTED: squamosa promoter-binding-like pr...   159   6e-37
ref|XP_002892031.1| hypothetical protein ARALYDRAFT_470069 [Arab...   159   6e-37
ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like pr...   159   8e-37
ref|NP_683267.1| squamosa promoter-binding-like protein 8 [Arabi...   158   1e-36

>ref|XP_001761751.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687122|gb|EDQ73507.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  159 bits (403), Expect = 5e-37
 Identities = 82/137 (59%), Positives = 94/137 (68%)
 Frame = -1

Query: 758 FSSRETALIDRLFRRPRGFYQANQVPRCQAEGCKIDLSNAKHYHRRHKVCEFHSKATKVV 579
           FS++ET  +  L +RP      +QVP CQAEGCK DLS AK YHRRHKVCE HSKA  VV
Sbjct: 260 FSTKET--VANLGKRPTAGSPGSQVPMCQAEGCKADLSQAKQYHRRHKVCEHHSKALNVV 317

Query: 578 AGGIEQRFCQQCSRFHVLAEFDQAKRSCRKRLADHNRRRRKPQPGQSTDSPPATTSENAN 399
           A G  QRFCQQCSRFH+L EFD  KRSCRKRLADHNRRRRKPQP  S  +P  TT+E+  
Sbjct: 318 ANGQTQRFCQQCSRFHLLGEFDDGKRSCRKRLADHNRRRRKPQPNAS--APGGTTAESPG 375

Query: 398 QQVGPSASASISRSDHK 348
            +   + S     +D K
Sbjct: 376 MKREDNLSGFNRTNDSK 392


>ref|XP_003571005.1| PREDICTED: squamosa promoter-binding-like protein 5-like
           [Brachypodium distachyon]
          Length = 384

 Score =  159 bits (402), Expect = 6e-37
 Identities = 82/152 (53%), Positives = 94/152 (61%), Gaps = 15/152 (9%)
 Frame = -1

Query: 758 FSSRETALIDRLFRRPRGFYQAN---------------QVPRCQAEGCKIDLSNAKHYHR 624
           FS  +   +DRL  R RG                    Q PRCQAEGCK DLS AKHYHR
Sbjct: 79  FSPADVLAVDRLLMRTRGGLGGGGMGVLGLGLGGGIMQQPPRCQAEGCKADLSAAKHYHR 138

Query: 623 RHKVCEFHSKATKVVAGGIEQRFCQQCSRFHVLAEFDQAKRSCRKRLADHNRRRRKPQPG 444
           RHKVCE+H+KA  V A G +QRFCQQCSRFHVLAEFD+AKRSCRKRL +HNRRRRKP   
Sbjct: 139 RHKVCEYHAKAAAVAANGKQQRFCQQCSRFHVLAEFDEAKRSCRKRLTEHNRRRRKPVGV 198

Query: 443 QSTDSPPATTSENANQQVGPSASASISRSDHK 348
           Q  DSPP   S+     +  S+ A    + +K
Sbjct: 199 QGKDSPPPPPSKKLEAGITTSSYAGDHTTTNK 230


>ref|XP_002892031.1| hypothetical protein ARALYDRAFT_470069 [Arabidopsis lyrata subsp.
           lyrata] gi|297337873|gb|EFH68290.1| hypothetical protein
           ARALYDRAFT_470069 [Arabidopsis lyrata subsp. lyrata]
          Length = 323

 Score =  159 bits (402), Expect = 6e-37
 Identities = 79/138 (57%), Positives = 93/138 (67%), Gaps = 4/138 (2%)
 Frame = -1

Query: 758 FSSRETALIDRLFRRPR----GFYQANQVPRCQAEGCKIDLSNAKHYHRRHKVCEFHSKA 591
           FS+ +   + RL+RR R    G   +   PRCQAEGC  DLS+AKHYHRRHKVCEFHSKA
Sbjct: 150 FSAADDDFVSRLYRRSRPGESGMGNSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKA 209

Query: 590 TKVVAGGIEQRFCQQCSRFHVLAEFDQAKRSCRKRLADHNRRRRKPQPGQSTDSPPATTS 411
           + VVA G+ QRFCQQCSRFH+L+EFD  KRSCRKRLADHNRRRRK     S     A  +
Sbjct: 210 STVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDAAKPT 269

Query: 410 ENANQQVGPSASASISRS 357
             + +  G  AS S S +
Sbjct: 270 PKSPKDSGVKASPSPSNA 287


>ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine
           max]
          Length = 336

 Score =  159 bits (401), Expect = 8e-37
 Identities = 81/147 (55%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
 Frame = -1

Query: 758 FSSRETALIDRLFRRPR----GFYQANQVPRCQAEGCKIDLSNAKHYHRRHKVCEFHSKA 591
           FSS E   + RL+RR R    G   ++  PRCQAEGC  DLS AKHYHRRHKVCEFHSKA
Sbjct: 166 FSSSEDDFVSRLYRRSRPVEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKA 225

Query: 590 TKVVAGGIEQRFCQQCSRFHVLAEFDQAKRSCRKRLADHNRRRRKP-------QPGQSTD 432
             V+A G+ QRFCQQCSRFH+L+EFD  KRSCRKRLADHNRRRRK        Q  QS+ 
Sbjct: 226 ATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQSSL 285

Query: 431 SPPATTSENANQQVGPSASASISRSDH 351
              A +  ++  Q   S + ++S  D+
Sbjct: 286 ENVARSPPDSGAQSSSSVTVAVSPPDY 312


>ref|NP_683267.1| squamosa promoter-binding-like protein 8 [Arabidopsis thaliana]
           gi|67461535|sp|Q8GXL3.2|SPL8_ARATH RecName:
           Full=Squamosa promoter-binding-like protein 8
           gi|5931679|emb|CAB56593.1| squamosa promoter binding
           protein-like 8 [Arabidopsis thaliana]
           gi|5931681|emb|CAB56594.1| squamosa promoter binding
           protein-like 8 [Arabidopsis thaliana]
           gi|332189253|gb|AEE27374.1| squamosa
           promoter-binding-like protein 8 [Arabidopsis thaliana]
          Length = 333

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/138 (57%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
 Frame = -1

Query: 758 FSSRETALIDRLFRRPR----GFYQANQVPRCQAEGCKIDLSNAKHYHRRHKVCEFHSKA 591
           FS+ +   + RL+RR R    G   +   PRCQAEGC  DLS+AKHYHRRHKVCEFHSKA
Sbjct: 157 FSAADDDFVSRLYRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKA 216

Query: 590 TKVVAGGIEQRFCQQCSRFHVLAEFDQAKRSCRKRLADHNRRRRKPQPGQST--DSPPAT 417
           + VVA G+ QRFCQQCSRFH+L+EFD  KRSCRKRLADHNRRRRK     S   D+    
Sbjct: 217 STVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASATQDTGTGK 276

Query: 416 TSENANQQVGPSASASIS 363
           T+  +    G  AS+S S
Sbjct: 277 TTPKSPNDSGVKASSSPS 294


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