BLASTX nr result

ID: Cimicifuga21_contig00025960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025960
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042798.2| Os01g0293600 [Oryza sativa Japonica Group] g...   100   2e-19
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    99   5e-19
ref|XP_003615119.1| Zinc finger MYM-type protein [Medicago trunc...    96   2e-18
ref|XP_003596572.1| Zinc finger MYM-type protein [Medicago trunc...    96   2e-18
ref|XP_003600945.1| HAT family dimerization domain containing pr...    94   9e-18

>ref|NP_001042798.2| Os01g0293600 [Oryza sativa Japonica Group]
           gi|255673136|dbj|BAF04712.2| Os01g0293600 [Oryza sativa
           Japonica Group]
          Length = 798

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -3

Query: 239 PALRKPISSYPPDEQDRIRRSYLLKGPCQPNHT-FPLTWFTDQNRGFQKSWYTRFGNWIE 63
           P LRKPI +YPP+ +D+++R+Y L GP QPN T FP  W   + R FQK+W+  F +W+E
Sbjct: 44  PGLRKPIEAYPPEIRDQVKRAYALSGPTQPNITIFPRKWQGGEWRSFQKTWFNEF-DWLE 102

Query: 62  YSISKDAAFCLYCYLF 15
           YS+SKDAA+CLYCY+F
Sbjct: 103 YSVSKDAAYCLYCYIF 118


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 239 PALRKPISSYPPDEQDRIRRSYLLKGPCQPN-HTFPLTWFTDQNRGFQKSWYTRFGNWIE 63
           P  R  +S+Y P++Q+ IRR+YL KGPCQPN H FP     +  R F  SW+  FGNW+E
Sbjct: 145 PGKRPKMSTYHPNDQEIIRRAYLQKGPCQPNQHNFPQRKIGNSMRRFCPSWFNEFGNWLE 204

Query: 62  YSISKDAAFCLYCYLFKRD 6
           YSI KDAAFCL CYLF+ D
Sbjct: 205 YSIEKDAAFCLCCYLFRPD 223


>ref|XP_003615119.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516454|gb|AES98077.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 787

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -3

Query: 239 PALRKPISSYPPDEQDRIRRSYLLKGPCQPN-HTFPLTWFTDQNRGFQKSWYTRFGNWIE 63
           P LRK I  Y PD QD++RR+Y+LKGP QPN  +FP T F    R F +SWY ++  WIE
Sbjct: 43  PGLRKQIWEYAPDIQDQVRRAYILKGPTQPNLASFPRTQFGRDARSFSRSWYNKY-TWIE 101

Query: 62  YSISKDAAFCLYCYLFKR 9
           YS SKDAA+C YC+LFK+
Sbjct: 102 YSESKDAAYCFYCFLFKQ 119


>ref|XP_003596572.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355485620|gb|AES66823.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 299

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -3

Query: 239 PALRKPISSYPPDEQDRIRRSYLLKGPCQPN-HTFPLTWFTDQNRGFQKSWYTRFGNWIE 63
           P LRK I  Y PD QD++RR+Y+LKGP QPN  +FP T F    R F +SWY ++  WIE
Sbjct: 43  PGLRKQIWEYAPDIQDQVRRAYILKGPTQPNLASFPRTQFGRDARSFSRSWYNKY-TWIE 101

Query: 62  YSISKDAAFCLYCYLFKR 9
           YS SKDAA+C YC+LFK+
Sbjct: 102 YSESKDAAYCFYCFLFKQ 119


>ref|XP_003600945.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355489993|gb|AES71196.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 835

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = -3

Query: 239 PALRKPISSYPPDEQDRIRRSYLLKGPCQPN-HTFPLTWFTDQNRGFQKSWYTRFGNWIE 63
           P  RK I +Y PD QD++RR+Y+LKGP QPN  +FP T F  Q R F  SWY ++  WIE
Sbjct: 88  PGRRKQIHTYAPDIQDQVRRAYILKGPMQPNLSSFPRTLFGSQRRAFCSSWYKKY-TWIE 146

Query: 62  YSISKDAAFCLYCYLFKR 9
           YS  KDAA+C YC+LFK+
Sbjct: 147 YSEFKDAAYCFYCFLFKQ 164


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