BLASTX nr result

ID: Cimicifuga21_contig00025953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025953
         (1658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   442   e-122
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   441   e-121
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   439   e-121
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   437   e-120
ref|XP_002302805.1| outward rectifying potassium channel [Populu...   435   e-119

>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  442 bits (1138), Expect = e-122
 Identities = 221/297 (74%), Positives = 253/297 (85%)
 Frame = -3

Query: 1635 KPEFGSGCMIKQALFLLTIYLVLGVMIYSFNREKYSGVETHPVVDAVYFCIITMCTIGYG 1456
            KP   S  +I+QA FLL +YL LGV+IYSFNR+ +SG+ETH VVDA+YFCI+TMCTIGYG
Sbjct: 94   KPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYG 153

Query: 1455 DITPLTPSTKVFACVFVLVGFGFIDILLGGVMNYVLDLQENMILTSVQVGNRVNREKGFS 1276
            DI PLTP+TKVFACVFVLVGFGFIDILL GV+NYVLDLQENMILT +QVG       GFS
Sbjct: 154  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAP--AGGFS 211

Query: 1275 AKDYIFDAEKGRMRIRMKVGLALGVVVLCIGSGIMVLSFVEGLNWVDSVYLSVMSVTTVG 1096
            A++YI D EKGRMRIR+KVGLALGVVVLCIG G MVL FVE L+W+D+VYLSVMSVTTVG
Sbjct: 212  ARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTTVG 271

Query: 1095 YGDRAFNTLLGRLFASFWLLFSTLAVGRAFLYLAEAXXXXXXXXXXKWVLQRDITVQDLL 916
            YGDRAF TL GRLFA+ WLLFSTLAV RAFLYLAEA          KWVL R+ITV+DLL
Sbjct: 272  YGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLL 331

Query: 915  AADVNNNGFMSKSDFVIYKLKEMGKIRQKDILQICSQFNKLDRSNSGRITLPDILDN 745
            AAD+NNNGF+SKS++VIYKLKEMGKI + D+LQIC+QFNKLD +NSG+ITLPD+L+N
Sbjct: 332  AADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLEN 388


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
            channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  441 bits (1134), Expect = e-121
 Identities = 220/297 (74%), Positives = 253/297 (85%)
 Frame = -3

Query: 1635 KPEFGSGCMIKQALFLLTIYLVLGVMIYSFNREKYSGVETHPVVDAVYFCIITMCTIGYG 1456
            KP   S  +I+QA FLL +YL LGV+IYSFNR+ +SG+ETH VVDA+YFCI+TMCTIGYG
Sbjct: 94   KPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYG 153

Query: 1455 DITPLTPSTKVFACVFVLVGFGFIDILLGGVMNYVLDLQENMILTSVQVGNRVNREKGFS 1276
            DI PLTP+TKVFACVFVLVGFGFIDILL GV+NYVLDLQENMILT +QVG       GFS
Sbjct: 154  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAP--AGGFS 211

Query: 1275 AKDYIFDAEKGRMRIRMKVGLALGVVVLCIGSGIMVLSFVEGLNWVDSVYLSVMSVTTVG 1096
            A++YI D EKGRMRIR+KVGLALGVVVLCIG G MVL FVE L+W+D+VYLSVMSVT+VG
Sbjct: 212  ARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVTSVG 271

Query: 1095 YGDRAFNTLLGRLFASFWLLFSTLAVGRAFLYLAEAXXXXXXXXXXKWVLQRDITVQDLL 916
            YGDRAF TL GRLFA+ WLLFSTLAV RAFLYLAEA          KWVL R+ITV+DLL
Sbjct: 272  YGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVEDLL 331

Query: 915  AADVNNNGFMSKSDFVIYKLKEMGKIRQKDILQICSQFNKLDRSNSGRITLPDILDN 745
            AAD+NNNGF+SKS++VIYKLKEMGKI + D+LQIC+QFNKLD +NSG+ITLPD+L+N
Sbjct: 332  AADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLEN 388


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222861033|gb|EEE98575.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 318

 Score =  439 bits (1130), Expect = e-121
 Identities = 220/302 (72%), Positives = 259/302 (85%)
 Frame = -3

Query: 1656 QPQIDKLKPEFGSGCMIKQALFLLTIYLVLGVMIYSFNREKYSGVETHPVVDAVYFCIIT 1477
            +PQI K +P+  S  +I+QA FLL++YL+LGV+IYSFN + +SG+ETHPVVDA+YFCI+T
Sbjct: 20   KPQIPKPQPD--STSIIRQATFLLSMYLLLGVIIYSFNTDHFSGIETHPVVDALYFCIVT 77

Query: 1476 MCTIGYGDITPLTPSTKVFACVFVLVGFGFIDILLGGVMNYVLDLQENMILTSVQVGNRV 1297
            MCTIGYGDITPLTP TKVFACVFVLVGFGFIDILL G++NYVLDLQE+MILT +++G   
Sbjct: 78   MCTIGYGDITPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGIEMGKNR 137

Query: 1296 NREKGFSAKDYIFDAEKGRMRIRMKVGLALGVVVLCIGSGIMVLSFVEGLNWVDSVYLSV 1117
            N E GFSA DYIFD +KGRMRIR+KVGLALGVVVLCIG G +VL F+E L+W+DSVYL+V
Sbjct: 138  NHE-GFSATDYIFDVKKGRMRIRLKVGLALGVVVLCIGIGTLVLYFLEDLDWIDSVYLAV 196

Query: 1116 MSVTTVGYGDRAFNTLLGRLFASFWLLFSTLAVGRAFLYLAEAXXXXXXXXXXKWVLQRD 937
            MSVTTVGYGDRAF TL GRLFA+ WLL STLAV RAFLYLAEA           WVL RD
Sbjct: 197  MSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVARAFLYLAEARIDKRHRRITNWVLHRD 256

Query: 936  ITVQDLLAADVNNNGFMSKSDFVIYKLKEMGKIRQKDILQICSQFNKLDRSNSGRITLPD 757
            ITV+DLLAAD+NNNGF+SKS++VIYKLKEMGKI +KDILQIC+QF+KLD +N G+ITLPD
Sbjct: 257  ITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKITLPD 316

Query: 756  IL 751
            +L
Sbjct: 317  LL 318


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
            [Ricinus communis] gi|223545669|gb|EEF47173.1|
            Calcium-activated outward-rectifying potassium channel,
            putative [Ricinus communis]
          Length = 390

 Score =  437 bits (1124), Expect = e-120
 Identities = 213/298 (71%), Positives = 256/298 (85%)
 Frame = -3

Query: 1635 KPEFGSGCMIKQALFLLTIYLVLGVMIYSFNREKYSGVETHPVVDAVYFCIITMCTIGYG 1456
            KP+  S  +I+QA+FLL +YL+LGV+IYSFNR+ +SG+ETHPVVDA+YFCI+TMCTIGYG
Sbjct: 92   KPQSESSSIIRQAIFLLFLYLLLGVVIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYG 151

Query: 1455 DITPLTPSTKVFACVFVLVGFGFIDILLGGVMNYVLDLQENMILTSVQVGNRVNREKGFS 1276
            DI PLTP+TKVFACVFVLVGFGFIDILL GV+NYVLDLQE+MIL  +Q+GN     +GFS
Sbjct: 152  DIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQESMILAGIQMGNNRTAHEGFS 211

Query: 1275 AKDYIFDAEKGRMRIRMKVGLALGVVVLCIGSGIMVLSFVEGLNWVDSVYLSVMSVTTVG 1096
            A++YI D EKGRMRIR+KVGLALGVVVLCIG G +VL ++E L+ +DS+YL+VMSVTTVG
Sbjct: 212  ARNYIVDVEKGRMRIRLKVGLALGVVVLCIGIGTLVLYYLEDLDCIDSIYLAVMSVTTVG 271

Query: 1095 YGDRAFNTLLGRLFASFWLLFSTLAVGRAFLYLAEAXXXXXXXXXXKWVLQRDITVQDLL 916
            YGDR F TL GRLFA+ WLL S+LAV RAFLYLAEA          KWVL RDITV+DL+
Sbjct: 272  YGDRVFKTLPGRLFAAIWLLVSSLAVARAFLYLAEARIDKRHRRITKWVLHRDITVEDLI 331

Query: 915  AADVNNNGFMSKSDFVIYKLKEMGKIRQKDILQICSQFNKLDRSNSGRITLPDILDNR 742
            AAD+NNNGF+SKS++VIYKLKEMGKI +KDILQIC+QF+KLD +N G+ITLPD+L+NR
Sbjct: 332  AADINNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKITLPDLLENR 389


>ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222844531|gb|EEE82078.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 379

 Score =  435 bits (1118), Expect = e-119
 Identities = 216/305 (70%), Positives = 258/305 (84%)
 Frame = -3

Query: 1656 QPQIDKLKPEFGSGCMIKQALFLLTIYLVLGVMIYSFNREKYSGVETHPVVDAVYFCIIT 1477
            +PQI K  P+  S  +I+QA+FLL++YL+LGV+IYSFN + +SG ETHPVVDA+YFCI+T
Sbjct: 77   KPQIPK--PQSESNSIIRQAIFLLSLYLLLGVVIYSFNTDHFSGTETHPVVDALYFCIVT 134

Query: 1476 MCTIGYGDITPLTPSTKVFACVFVLVGFGFIDILLGGVMNYVLDLQENMILTSVQVGNRV 1297
            MCTIGYGDI PLTP TKVFACVFVLVGFGFIDILL G++NYVLDLQE+MILT +++    
Sbjct: 135  MCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGIEMSKNR 194

Query: 1296 NREKGFSAKDYIFDAEKGRMRIRMKVGLALGVVVLCIGSGIMVLSFVEGLNWVDSVYLSV 1117
            NRE GFSA DYI D +KGRMRIR+KVGLALGVV+LCIG G +VL F+E L+W+DSVYL+V
Sbjct: 195  NRE-GFSAADYIIDVKKGRMRIRLKVGLALGVVILCIGIGTLVLYFLEDLDWIDSVYLAV 253

Query: 1116 MSVTTVGYGDRAFNTLLGRLFASFWLLFSTLAVGRAFLYLAEAXXXXXXXXXXKWVLQRD 937
            MSVTTVGYGDRAF +L GRLFA+ WLL STLAV RAFLYLAEA           WVL RD
Sbjct: 254  MSVTTVGYGDRAFKSLPGRLFAAIWLLVSTLAVARAFLYLAEARIDKRHRRISNWVLHRD 313

Query: 936  ITVQDLLAADVNNNGFMSKSDFVIYKLKEMGKIRQKDILQICSQFNKLDRSNSGRITLPD 757
            ITV+DLLAAD+NNNGF+SKS++VIYKLKEMGKI +KD+LQIC+QF+KLD +N G+ITLPD
Sbjct: 314  ITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGEKDVLQICNQFSKLDPNNLGKITLPD 373

Query: 756  ILDNR 742
            +L +R
Sbjct: 374  LLGHR 378


Top