BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025930
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   603   e-170
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   597   e-168
ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   587   e-165
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
gb|AFK42213.1| unknown [Lotus japonicus]                              577   e-162

>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
            communis] gi|223543878|gb|EEF45404.1|
            ribonucleoside-diphosphate reductase small chain,
            putative [Ricinus communis]
          Length = 342

 Score =  603 bits (1556), Expect = e-170
 Identities = 295/342 (86%), Positives = 313/342 (91%), Gaps = 3/342 (0%)
 Frame = +1

Query: 100  MGSLKNENGGQRA---VEEEPILMENSQRFCMFPVKYIQIWEMYKKAEASFWTAEEVDLS 270
            MGSL N    +RA    EEEPIL E +QRFCMFP++Y  +WEMYKKAEASFWTAEEVDLS
Sbjct: 1    MGSLTNSKDEERAREDEEEEPILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLS 60

Query: 271  QDVQQWEKLSDSEKHFISHVLAFFAASDGIVLENLAVRFLKDVQAPEARAFYGFQIAMEN 450
            QDVQQWE LS SEKHFISHVLAFFAASDGIVLENLA RFL D+Q PEARAFYGFQIAMEN
Sbjct: 61   QDVQQWETLSVSEKHFISHVLAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMEN 120

Query: 451  IHSEMYSLLLETYIKDSKEKERLFNAVENIPCVARKAKWALDWIHSSNSFAERLVAFSCV 630
            IHSEMYSLLLETYIKDS+EK RLFNA+E IPCVARKAKWALDWIHSS+ +AERLVAF+CV
Sbjct: 121  IHSEMYSLLLETYIKDSREKNRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACV 180

Query: 631  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNQLNWQRVHR 810
            EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ QL WQ+V +
Sbjct: 181  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQ 240

Query: 811  IVHEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADHLLVSLGCQRKYNVDNPFDWME 990
            IVHEAVEIETEFVCDALPCALIGMNS LMSQYIKFVAD LLV+LG QRKYNV+NPFDWME
Sbjct: 241  IVHEAVEIETEFVCDALPCALIGMNSTLMSQYIKFVADRLLVALGYQRKYNVENPFDWME 300

Query: 991  FISLQGKTNFFERRVGDYQKASVMSSLQNGGGNFVFKLDEDF 1116
            FISLQGK NFFERRVGDYQKASVMSSLQ+GG NFVFK+DEDF
Sbjct: 301  FISLQGKANFFERRVGDYQKASVMSSLQDGGKNFVFKMDEDF 342


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
            gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
            subunit [Glycine max]
          Length = 339

 Score =  597 bits (1538), Expect = e-168
 Identities = 292/339 (86%), Positives = 310/339 (91%)
 Frame = +1

Query: 100  MGSLKNENGGQRAVEEEPILMENSQRFCMFPVKYIQIWEMYKKAEASFWTAEEVDLSQDV 279
            MGSL+N    +   E+EPILME SQRFCMFP++Y QIWEMYKKAEASFWTAEEVDLS DV
Sbjct: 1    MGSLENNGVDKARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDV 60

Query: 280  QQWEKLSDSEKHFISHVLAFFAASDGIVLENLAVRFLKDVQAPEARAFYGFQIAMENIHS 459
            Q WE LS SEKHFI+HVLAFFAASDGIVLENLA RFL DVQ PEARAFYGFQIAMENIHS
Sbjct: 61   QHWETLSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHS 120

Query: 460  EMYSLLLETYIKDSKEKERLFNAVENIPCVARKAKWALDWIHSSNSFAERLVAFSCVEGI 639
            EMYSLLLETYIKDS+EK +LFNA+EN+PCVARKA+WAL WIHSS SFAERLVAF+CVEGI
Sbjct: 121  EMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEGI 180

Query: 640  FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNQLNWQRVHRIVH 819
            FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR  L   +VH++VH
Sbjct: 181  FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVHKLVH 240

Query: 820  EAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADHLLVSLGCQRKYNVDNPFDWMEFIS 999
            EAVEIETEFVCDALPCALIGMNSVLMSQYIKFVAD LLV+LG QRKYNV+NPFDWMEFIS
Sbjct: 241  EAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFIS 300

Query: 1000 LQGKTNFFERRVGDYQKASVMSSLQNGGGNFVFKLDEDF 1116
            LQGK NFFERRVGDYQKASVMSSLQ+ G NFVFKLDEDF
Sbjct: 301  LQGKANFFERRVGDYQKASVMSSLQDAGKNFVFKLDEDF 339


>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A [Vitis
            vinifera]
          Length = 340

 Score =  587 bits (1513), Expect = e-165
 Identities = 287/341 (84%), Positives = 310/341 (90%), Gaps = 2/341 (0%)
 Frame = +1

Query: 100  MGSLKN--ENGGQRAVEEEPILMENSQRFCMFPVKYIQIWEMYKKAEASFWTAEEVDLSQ 273
            MGSL N  +       EEEPILM+NSQRFCMFP++Y Q+WEMYKKAEASFWTAEEVDLS 
Sbjct: 1    MGSLTNGIDKRPDEEQEEEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSH 60

Query: 274  DVQQWEKLSDSEKHFISHVLAFFAASDGIVLENLAVRFLKDVQAPEARAFYGFQIAMENI 453
            DVQQWE LS+SEKHFISHVLAFFAASDGIVLENLA RFL D+Q PEARAFYGFQIAMENI
Sbjct: 61   DVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENI 120

Query: 454  HSEMYSLLLETYIKDSKEKERLFNAVENIPCVARKAKWALDWIHSSNSFAERLVAFSCVE 633
            HSEMYSLLLETYIKDSKEK RLFNA+E+I CVA KAKWALDWI SS  FAERL+AF+CVE
Sbjct: 121  HSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERLIAFACVE 180

Query: 634  GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNQLNWQRVHRI 813
            GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ QL WQ+VH I
Sbjct: 181  GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHI 240

Query: 814  VHEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADHLLVSLGCQRKYNVDNPFDWMEF 993
            VHEAVEIET+FVC+ALPCALIGMN+ LMSQYIKFVAD LLV+LG +RKYNV+NPFDWMEF
Sbjct: 241  VHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYNVENPFDWMEF 300

Query: 994  ISLQGKTNFFERRVGDYQKASVMSSLQNGGGNFVFKLDEDF 1116
            ISLQGK NFFERRVGDYQKAS+MSSL +GG N+VFK+DEDF
Sbjct: 301  ISLQGKANFFERRVGDYQKASIMSSL-DGGKNYVFKIDEDF 340


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  587 bits (1512), Expect = e-165
 Identities = 285/342 (83%), Positives = 311/342 (90%), Gaps = 3/342 (0%)
 Frame = +1

Query: 100  MGSLKNENGGQRAVEE---EPILMENSQRFCMFPVKYIQIWEMYKKAEASFWTAEEVDLS 270
            MGSL+N    +R  EE   EPIL E +QRFCMFP++Y ++WEMYKKAEASFWTAEEVDLS
Sbjct: 1    MGSLRNGTESERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLS 60

Query: 271  QDVQQWEKLSDSEKHFISHVLAFFAASDGIVLENLAVRFLKDVQAPEARAFYGFQIAMEN 450
            +D+QQWE LSDSEKHFISHVLAFFAASDGIVLENLA RFL DVQ PEARAFYGFQIAMEN
Sbjct: 61   RDMQQWEALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMEN 120

Query: 451  IHSEMYSLLLETYIKDSKEKERLFNAVENIPCVARKAKWALDWIHSSNSFAERLVAFSCV 630
            IHSEMYSLLLETYIKDS+EK RLFNA+ENIPCVA KAKWALDWI SS  FAERLVAF+C+
Sbjct: 121  IHSEMYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERLVAFACI 180

Query: 631  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNQLNWQRVHR 810
            EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ QL+WQ+V+ 
Sbjct: 181  EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHWQKVYH 240

Query: 811  IVHEAVEIETEFVCDALPCALIGMNSVLMSQYIKFVADHLLVSLGCQRKYNVDNPFDWME 990
            IV EAVEIET+FVC+ALPCALIGMN+ LM  YIKFVAD LLV+LG Q+KYNV+NPFDWME
Sbjct: 241  IVGEAVEIETKFVCEALPCALIGMNATLMGDYIKFVADRLLVALGYQKKYNVENPFDWME 300

Query: 991  FISLQGKTNFFERRVGDYQKASVMSSLQNGGGNFVFKLDEDF 1116
            FISLQGK NFFERRVGDYQKASVMSSLQ+GG N+VFK+DEDF
Sbjct: 301  FISLQGKANFFERRVGDYQKASVMSSLQDGGKNYVFKMDEDF 342


>gb|AFK42213.1| unknown [Lotus japonicus]
          Length = 351

 Score =  577 bits (1487), Expect = e-162
 Identities = 277/325 (85%), Positives = 303/325 (93%)
 Frame = +1

Query: 142  EEEPILMENSQRFCMFPVKYIQIWEMYKKAEASFWTAEEVDLSQDVQQWEKLSDSEKHFI 321
            E+EPILME +QRFCMFP++Y Q+WEMYKKA+ASFWTAEEVDL+ DVQ W  LS+SEKHFI
Sbjct: 27   EQEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFI 86

Query: 322  SHVLAFFAASDGIVLENLAVRFLKDVQAPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 501
            +HVLAFFAASDGIVLENLA RFL DVQ PEARAFYGFQIAMENIHSEMYSLLLET IKDS
Sbjct: 87   THVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDS 146

Query: 502  KEKERLFNAVENIPCVARKAKWALDWIHSSNSFAERLVAFSCVEGIFFSGSFCAIFWLKK 681
            +EK RLFNA+EN+PCVARKA+WAL+WI+SS SFAERLVAF+C+EGIFFSGSFC+IFWLKK
Sbjct: 147  REKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKK 206

Query: 682  RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNQLNWQRVHRIVHEAVEIETEFVCDAL 861
            RGLMPGLTFSNELISRDEGLHCDFACLLYSLL+  L+ +RVH IVHEAVEIETEFVC+AL
Sbjct: 207  RGLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEAL 266

Query: 862  PCALIGMNSVLMSQYIKFVADHLLVSLGCQRKYNVDNPFDWMEFISLQGKTNFFERRVGD 1041
            PCALIGMNS LMSQYIKFVAD LLVSLG Q+KYNV+NPFDWMEFISLQGK NFFERRVG+
Sbjct: 267  PCALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVENPFDWMEFISLQGKANFFERRVGE 326

Query: 1042 YQKASVMSSLQNGGGNFVFKLDEDF 1116
            YQKASVMSSLQ+ G NFVFKLDEDF
Sbjct: 327  YQKASVMSSLQDAGKNFVFKLDEDF 351