BLASTX nr result

ID: Cimicifuga21_contig00025924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025924
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276690.1| PREDICTED: uncharacterized protein LOC100248...    85   5e-15
ref|XP_002529253.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
emb|CBI37935.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002313742.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_004158413.1| PREDICTED: uncharacterized protein LOC101224...    65   6e-09

>ref|XP_002276690.1| PREDICTED: uncharacterized protein LOC100248664 [Vitis vinifera]
          Length = 2129

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
 Frame = -2

Query: 385  PSDSLLDIIQSVSDTCIRDTIGDCAQLIYVLHAISLQRLVDLNRLIKAFEFLLDKFVRLA 206
            PS SL +IIQS+ D   +D +  C+ L+YVLH ++LQRLVDLNR IK+FE+LL    +L 
Sbjct: 902  PSASLPNIIQSILDLYPQDRVVTCSPLVYVLHTMALQRLVDLNRQIKSFEYLLQSNNKLV 961

Query: 205  GMSLKNDVDSRPCCKERTFIEKR---------VSVLRQEAEDLTNFLMSYLPVVEKKVD- 56
               L +D D    C E+     +         ++VLR+EA  LT+F+M  + +V KK   
Sbjct: 962  QEKLMDD-DGLSQCHEKDIKSNKKKSRKWKRFIAVLREEATGLTDFMMGSVSLVTKKQQC 1020

Query: 55   -SMFTDNNIKD 26
             S F D   KD
Sbjct: 1021 FSSFDDTTCKD 1031


>ref|XP_002529253.1| conserved hypothetical protein [Ricinus communis]
            gi|223531289|gb|EEF33131.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2057

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/105 (39%), Positives = 65/105 (61%)
 Frame = -2

Query: 385  PSDSLLDIIQSVSDTCIRDTIGDCAQLIYVLHAISLQRLVDLNRLIKAFEFLLDKFVRLA 206
            PS SLL +I+SVSD C + +  DC+ LIY+ HA++LQRL DLNR IK  +++      + 
Sbjct: 897  PSASLLVVIKSVSDNCPQGSNADCSPLIYIFHAMALQRLNDLNRQIKYLDYIRKSIDSII 956

Query: 205  GMSLKNDVDSRPCCKERTFIEKRVSVLRQEAEDLTNFLMSYLPVV 71
             ++L +D      CK      + +S L++EAE L  ++MS+L ++
Sbjct: 957  EVNLLDDASLSQYCKRNRKWGRHLSCLKEEAEGLAEYIMSHLSLL 1001


>emb|CBI37935.3| unnamed protein product [Vitis vinifera]
          Length = 1831

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/107 (45%), Positives = 68/107 (63%)
 Frame = -2

Query: 385  PSDSLLDIIQSVSDTCIRDTIGDCAQLIYVLHAISLQRLVDLNRLIKAFEFLLDKFVRLA 206
            PS SL +IIQS+ D   +D +  C+ L+YVLH ++LQRLVDLNR IK+FE+LL      +
Sbjct: 853  PSASLPNIIQSILDLYPQDRVVTCSPLVYVLHTMALQRLVDLNRQIKSFEYLLQ-----S 907

Query: 205  GMSLKNDVDSRPCCKERTFIEKRVSVLRQEAEDLTNFLMSYLPVVEK 65
               L N   SR   K + FI    +VLR+EA  LT+F+M  + +V+K
Sbjct: 908  NNKLSNKKKSR---KWKRFI----AVLREEATGLTDFMMGSVSLVKK 947


>ref|XP_002313742.1| predicted protein [Populus trichocarpa] gi|222850150|gb|EEE87697.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/97 (37%), Positives = 58/97 (59%)
 Frame = -2

Query: 328 TIGDCAQLIYVLHAISLQRLVDLNRLIKAFEFLLDKFVRLAGMSLKNDVDSRPCCKERTF 149
           ++ DC  LIYVLH ++LQ+LVDLNR IK+ E++      +    L +D  S    K    
Sbjct: 86  SMADCCPLIYVLHTMALQKLVDLNRQIKSSEYMQQSNDNIVRFKLLDDAGSSLYRKRSRK 145

Query: 148 IEKRVSVLRQEAEDLTNFLMSYLPVVEKKVDSMFTDN 38
             K ++ ++QEA DLT F+MSYL ++  +  ++++ N
Sbjct: 146 WNKHITTVKQEAADLTGFMMSYLSLLINEQLAVYSSN 182


>ref|XP_004158413.1| PREDICTED: uncharacterized protein LOC101224847 [Cucumis sativus]
          Length = 1981

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/106 (41%), Positives = 62/106 (58%)
 Frame = -2

Query: 382  SDSLLDIIQSVSDTCIRDTIGDCAQLIYVLHAISLQRLVDLNRLIKAFEFLLDKFVRLAG 203
            S S+L II+SV     + T      LIYVL  + LQRLVDLN+ I + E+L  +   L  
Sbjct: 867  SASVLVIIESVCSLYHQSTNVGWYPLIYVLLIMVLQRLVDLNKQIGSLEYLHQRSENLMQ 926

Query: 202  MSLKNDVDSRPCCKERTFIEKRVSVLRQEAEDLTNFLMSYLPVVEK 65
            + + +D D     K+     + VSVLR+EAEDLT+F+M +L +V K
Sbjct: 927  VEVLSDDDLSVLQKKIKKFGRLVSVLRKEAEDLTDFMMGHLSLVAK 972


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