BLASTX nr result
ID: Cimicifuga21_contig00025898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025898 (571 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur... 286 2e-75 ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ... 286 2e-75 ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti... 281 5e-74 emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera] 281 5e-74 ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|2... 277 1e-72 >ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like [Cucumis sativus] Length = 423 Score = 286 bits (732), Expect = 2e-75 Identities = 135/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%) Frame = -3 Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390 L QW+ FTKL+GIT+RG G+IDGRGS+WW+D + ++PIDDE KL++P+ N T++ PTP Sbjct: 86 LLQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPVNN-TINETKPTP 144 Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213 I S L+G MPSIKPTALRFYGSFN TVTGI I NSPQCHLKFDNCVGV V D+SV+SPGD Sbjct: 145 IGSNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGD 204 Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33 SLNTDGIHLQNS+DVLI T+L+CGDDC+SIQTGCSN+YIHNVNC GKD+ Sbjct: 205 SLNTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDH 264 Query: 32 TKACVSNITV 3 TKACVSNITV Sbjct: 265 TKACVSNITV 274 >ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus] Length = 505 Score = 286 bits (732), Expect = 2e-75 Identities = 135/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%) Frame = -3 Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390 L QW+ FTKL+GIT+RG G+IDGRGS+WW+D + ++PIDDE KL++P+ N T++ PTP Sbjct: 168 LLQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPVNN-TINETKPTP 226 Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213 I S L+G MPSIKPTALRFYGSFN TVTGI I NSPQCHLKFDNCVGV V D+SV+SPGD Sbjct: 227 IGSNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGD 286 Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33 SLNTDGIHLQNS+DVLI T+L+CGDDC+SIQTGCSN+YIHNVNC GKD+ Sbjct: 287 SLNTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDH 346 Query: 32 TKACVSNITV 3 TKACVSNITV Sbjct: 347 TKACVSNITV 356 >ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera] gi|297739064|emb|CBI28553.3| unnamed protein product [Vitis vinifera] Length = 505 Score = 281 bits (719), Expect = 5e-74 Identities = 135/190 (71%), Positives = 155/190 (81%), Gaps = 1/190 (0%) Frame = -3 Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390 L W+ FTKL GIT+RG GVIDG+GS+WW+D +DP+DDE KL++P+ N T NSP P Sbjct: 169 LLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPL-NRTAKENSPIP 227 Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213 INS+L MPS KPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV+V++MSV+SPGD Sbjct: 228 INSKLGSKMPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGD 287 Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33 S+NTDGIHLQNS+DVLI TNLACGDDC+SIQTGCSNVYIHNVNC G+D Sbjct: 288 SVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDG 347 Query: 32 TKACVSNITV 3 TKACVSNITV Sbjct: 348 TKACVSNITV 357 >emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera] Length = 388 Score = 281 bits (719), Expect = 5e-74 Identities = 135/190 (71%), Positives = 155/190 (81%), Gaps = 1/190 (0%) Frame = -3 Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390 L W+ FTKL GIT+RG GVIDG+GS+WW+D +DP+DDE KL++P+ N T NSP P Sbjct: 52 LLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPL-NRTAKENSPIP 110 Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213 INS+L MPS KPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV+V++MSV+SPGD Sbjct: 111 INSKLGSKMPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGD 170 Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33 S+NTDGIHLQNS+DVLI TNLACGDDC+SIQTGCSNVYIHNVNC G+D Sbjct: 171 SVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDG 230 Query: 32 TKACVSNITV 3 TKACVSNITV Sbjct: 231 TKACVSNITV 240 >ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|222863652|gb|EEF00783.1| predicted protein [Populus trichocarpa] Length = 382 Score = 277 bits (708), Expect = 1e-72 Identities = 135/190 (71%), Positives = 151/190 (79%), Gaps = 1/190 (0%) Frame = -3 Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390 LFQWL FTKL+GIT++G G IDG GS+WW+D DPID+E++ +VP+ N T + P P Sbjct: 46 LFQWLEFTKLVGITIQGEGTIDGSGSVWWQDYPFEDPIDNESEFIVPLNN-TAQQHPPMP 104 Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213 I SEL G MPSIKPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV V DM +SPGD Sbjct: 105 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDMRTSSPGD 164 Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33 S NTDGIHLQNS+DVLI T+LACGDDC+SIQTGCSNVYIHNVNC GKDN Sbjct: 165 SPNTDGIHLQNSKDVLIHSTDLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDN 224 Query: 32 TKACVSNITV 3 TKACVSNITV Sbjct: 225 TKACVSNITV 234