BLASTX nr result

ID: Cimicifuga21_contig00025898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025898
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur...   286   2e-75
ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   286   2e-75
ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   281   5e-74
emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]   281   5e-74
ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|2...   277   1e-72

>ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
           [Cucumis sativus]
          Length = 423

 Score =  286 bits (732), Expect = 2e-75
 Identities = 135/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
 Frame = -3

Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390
           L QW+ FTKL+GIT+RG G+IDGRGS+WW+D + ++PIDDE KL++P+ N T++   PTP
Sbjct: 86  LLQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPVNN-TINETKPTP 144

Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213
           I S L+G MPSIKPTALRFYGSFN TVTGI I NSPQCHLKFDNCVGV V D+SV+SPGD
Sbjct: 145 IGSNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGD 204

Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33
           SLNTDGIHLQNS+DVLI  T+L+CGDDC+SIQTGCSN+YIHNVNC           GKD+
Sbjct: 205 SLNTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDH 264

Query: 32  TKACVSNITV 3
           TKACVSNITV
Sbjct: 265 TKACVSNITV 274


>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  286 bits (732), Expect = 2e-75
 Identities = 135/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
 Frame = -3

Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390
           L QW+ FTKL+GIT+RG G+IDGRGS+WW+D + ++PIDDE KL++P+ N T++   PTP
Sbjct: 168 LLQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPVNN-TINETKPTP 226

Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213
           I S L+G MPSIKPTALRFYGSFN TVTGI I NSPQCHLKFDNCVGV V D+SV+SPGD
Sbjct: 227 IGSNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGD 286

Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33
           SLNTDGIHLQNS+DVLI  T+L+CGDDC+SIQTGCSN+YIHNVNC           GKD+
Sbjct: 287 SLNTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDH 346

Query: 32  TKACVSNITV 3
           TKACVSNITV
Sbjct: 347 TKACVSNITV 356


>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|297739064|emb|CBI28553.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  281 bits (719), Expect = 5e-74
 Identities = 135/190 (71%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
 Frame = -3

Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390
           L  W+ FTKL GIT+RG GVIDG+GS+WW+D   +DP+DDE KL++P+ N T   NSP P
Sbjct: 169 LLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPL-NRTAKENSPIP 227

Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213
           INS+L   MPS KPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV+V++MSV+SPGD
Sbjct: 228 INSKLGSKMPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGD 287

Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33
           S+NTDGIHLQNS+DVLI  TNLACGDDC+SIQTGCSNVYIHNVNC           G+D 
Sbjct: 288 SVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDG 347

Query: 32  TKACVSNITV 3
           TKACVSNITV
Sbjct: 348 TKACVSNITV 357


>emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]
          Length = 388

 Score =  281 bits (719), Expect = 5e-74
 Identities = 135/190 (71%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
 Frame = -3

Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390
           L  W+ FTKL GIT+RG GVIDG+GS+WW+D   +DP+DDE KL++P+ N T   NSP P
Sbjct: 52  LLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPL-NRTAKENSPIP 110

Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213
           INS+L   MPS KPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV+V++MSV+SPGD
Sbjct: 111 INSKLGSKMPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGD 170

Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33
           S+NTDGIHLQNS+DVLI  TNLACGDDC+SIQTGCSNVYIHNVNC           G+D 
Sbjct: 171 SVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDG 230

Query: 32  TKACVSNITV 3
           TKACVSNITV
Sbjct: 231 TKACVSNITV 240


>ref|XP_002314612.1| predicted protein [Populus trichocarpa] gi|222863652|gb|EEF00783.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  277 bits (708), Expect = 1e-72
 Identities = 135/190 (71%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
 Frame = -3

Query: 569 LFQWLLFTKLIGITVRGGGVIDGRGSIWWKDLALNDPIDDETKLLVPIPNITVDVNSPTP 390
           LFQWL FTKL+GIT++G G IDG GS+WW+D    DPID+E++ +VP+ N T   + P P
Sbjct: 46  LFQWLEFTKLVGITIQGEGTIDGSGSVWWQDYPFEDPIDNESEFIVPLNN-TAQQHPPMP 104

Query: 389 INSELDG-MPSIKPTALRFYGSFNVTVTGIKIINSPQCHLKFDNCVGVNVFDMSVTSPGD 213
           I SEL G MPSIKPTALRFYGSFNVTVTGI I NSPQCHLKFDNC+GV V DM  +SPGD
Sbjct: 105 IRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDMRTSSPGD 164

Query: 212 SLNTDGIHLQNSRDVLIRGTNLACGDDCISIQTGCSNVYIHNVNCXXXXXXXXXXXGKDN 33
           S NTDGIHLQNS+DVLI  T+LACGDDC+SIQTGCSNVYIHNVNC           GKDN
Sbjct: 165 SPNTDGIHLQNSKDVLIHSTDLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDN 224

Query: 32  TKACVSNITV 3
           TKACVSNITV
Sbjct: 225 TKACVSNITV 234


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