BLASTX nr result

ID: Cimicifuga21_contig00025896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025896
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR24605.1| initiation factor IF1 [Schumacheria alnifolia]         134   2e-29
gb|AAK38863.1|AF347640_1 translation initiation factor IF1 [Bora...   133   3e-29
gb|ACR24530.1| initiation factor IF1 [Hibbertia banksii] gi|2378...   133   3e-29
gb|ACR24536.1| initiation factor IF1 [Hibbertia bracteata] gi|23...   133   4e-29
gb|ACR24593.1| initiation factor IF1 [Hibbertia dilatata] gi|237...   132   5e-29

>gb|ACR24605.1| initiation factor IF1 [Schumacheria alnifolia]
          Length = 77

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/75 (86%), Positives = 68/75 (90%)
 Frame = -2

Query: 494 KEEKWTHEGLITESLPNGMFRVRLDNGDMTLGYISGKIRRDSIRILPGDRVKIEITRYDS 315
           KE+KW HEGLITESLPNGMFRVRLDN DM LGYISGKIRR  IRILPGDRVKIEI+RYDS
Sbjct: 2   KEKKWIHEGLITESLPNGMFRVRLDNEDMILGYISGKIRRSFIRILPGDRVKIEISRYDS 61

Query: 314 TRGRITYRLRNKSNN 270
           TRGRI YRLRNK +N
Sbjct: 62  TRGRIIYRLRNKDSN 76


>gb|AAK38863.1|AF347640_1 translation initiation factor IF1 [Borago officinalis]
          Length = 84

 Score =  133 bits (335), Expect = 3e-29
 Identities = 63/76 (82%), Positives = 68/76 (89%)
 Frame = -2

Query: 500 GKKEEKWTHEGLITESLPNGMFRVRLDNGDMTLGYISGKIRRDSIRILPGDRVKIEITRY 321
           G KEEKW HEGLITESLPNGMFRVRLDN D+ LGY+SGKIRR  IRILPGDRVKIE++RY
Sbjct: 7   GMKEEKWIHEGLITESLPNGMFRVRLDNEDLVLGYVSGKIRRSFIRILPGDRVKIEVSRY 66

Query: 320 DSTRGRITYRLRNKSN 273
           DSTRGRI YRLRNK +
Sbjct: 67  DSTRGRIIYRLRNKDS 82


>gb|ACR24530.1| initiation factor IF1 [Hibbertia banksii]
           gi|237861831|gb|ACR24533.1| initiation factor IF1
           [Hibbertia baudouinii] gi|237861855|gb|ACR24551.1|
           initiation factor IF1 [Hibbertia drummondii]
           gi|237861867|gb|ACR24560.1| initiation factor IF1
           [Hibbertia exasperata] gi|237861879|gb|ACR24569.1|
           initiation factor IF1 [Hibbertia hamulosa]
           gi|237861883|gb|ACR24572.1| initiation factor IF1
           [Hibbertia hermanniifolia] gi|237861887|gb|ACR24575.1|
           initiation factor IF1 [Hibbertia hypericoides]
           gi|237861891|gb|ACR24578.1| initiation factor IF1
           [Hibbertia microphylla]
          Length = 77

 Score =  133 bits (335), Expect = 3e-29
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -2

Query: 494 KEEKWTHEGLITESLPNGMFRVRLDNGDMTLGYISGKIRRDSIRILPGDRVKIEITRYDS 315
           KE+KW HEGLITESLPNGMFRVRLDN DM LGY+SGKIRR  IRILPGDRVKIEI+RYDS
Sbjct: 2   KEKKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEISRYDS 61

Query: 314 TRGRITYRLRNKSNN 270
           TRGRI YRLRNK +N
Sbjct: 62  TRGRIIYRLRNKDSN 76


>gb|ACR24536.1| initiation factor IF1 [Hibbertia bracteata]
           gi|237861907|gb|ACR24590.1| initiation factor IF1
           [Hibbertia vestita]
          Length = 77

 Score =  133 bits (334), Expect = 4e-29
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = -2

Query: 494 KEEKWTHEGLITESLPNGMFRVRLDNGDMTLGYISGKIRRDSIRILPGDRVKIEITRYDS 315
           KE+KW HEGLITESLPNGMFR+RLDN DM LGY+SGKIRR  IRILPGDRVKIEI+RYDS
Sbjct: 2   KEKKWIHEGLITESLPNGMFRIRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEISRYDS 61

Query: 314 TRGRITYRLRNKSNN 270
           TRGRI YRLRNK +N
Sbjct: 62  TRGRIIYRLRNKDSN 76


>gb|ACR24593.1| initiation factor IF1 [Hibbertia dilatata]
           gi|237861915|gb|ACR24596.1| initiation factor IF1
           [Pachynema junceum] gi|237861919|gb|ACR24599.1|
           initiation factor IF1 [Pachynema sphenandrum]
          Length = 77

 Score =  132 bits (333), Expect = 5e-29
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -2

Query: 494 KEEKWTHEGLITESLPNGMFRVRLDNGDMTLGYISGKIRRDSIRILPGDRVKIEITRYDS 315
           KE+KW HEGLITESLPNGMFRVRLDN DM LGY+SGKIRR  IRILPGDRVKIEI RYDS
Sbjct: 2   KEKKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEIGRYDS 61

Query: 314 TRGRITYRLRNKSNN 270
           TRGRI YRLRNK++N
Sbjct: 62  TRGRIIYRLRNKNSN 76


Top