BLASTX nr result
ID: Cimicifuga21_contig00025894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00025894
(788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop... 261 9e-68
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2... 249 4e-64
ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814... 242 8e-62
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop... 241 1e-61
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu... 237 2e-60
>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
protein product [Vitis vinifera]
Length = 340
Score = 261 bits (668), Expect = 9e-68
Identities = 128/186 (68%), Positives = 142/186 (76%)
Frame = +3
Query: 3 DPFGDPKIIGDPYSTLFVGHLNHLTTEDTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFV 182
DPFGDPK+IGDPY T+FVGHLNHLTTEDTLHKAMSK+G+VK+LRLVRHIVTGAS GYAFV
Sbjct: 48 DPFGDPKVIGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFV 107
Query: 183 EFXXXXXXXXXXXXXXXXXXXXXXXXXXYAFVEFDSEREMRRAYQDAHHKIIDDSEIIVD 362
E+++EREMRRAY+DAHH +IDD EIIVD
Sbjct: 108 --------------------------------EYETEREMRRAYEDAHHSMIDDCEIIVD 135
Query: 363 YNRQQLMPGWIPRRFXXXXXXKKESGQLRFGGRERPFQAPIKPIPYDDLKRLGIPPPPEG 542
YNRQQLMPGWIPRR KKESGQLRFGGRERPF+AP++PIP DDLKRLGIPPPPEG
Sbjct: 136 YNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIPLDDLKRLGIPPPPEG 195
Query: 543 RYMARF 560
RYM+RF
Sbjct: 196 RYMSRF 201
>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
predicted protein [Populus trichocarpa]
Length = 317
Score = 249 bits (637), Expect = 4e-64
Identities = 125/186 (67%), Positives = 136/186 (73%)
Frame = +3
Query: 3 DPFGDPKIIGDPYSTLFVGHLNHLTTEDTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFV 182
DPFGDPK IGDPY T+FVG L+HLTTEDTL KAMSKYGKVKNLRLVRHIVTGAS GYAFV
Sbjct: 48 DPFGDPKAIGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFV 107
Query: 183 EFXXXXXXXXXXXXXXXXXXXXXXXXXXYAFVEFDSEREMRRAYQDAHHKIIDDSEIIVD 362
EF++EREMRRAY+D H IDDSEIIVD
Sbjct: 108 --------------------------------EFETEREMRRAYKDGQHSYIDDSEIIVD 135
Query: 363 YNRQQLMPGWIPRRFXXXXXXKKESGQLRFGGRERPFQAPIKPIPYDDLKRLGIPPPPEG 542
YNRQQLMPGWIPRR +KESGQLRFGGRERPF+AP++ IPYDDLKRLGIPPPPEG
Sbjct: 136 YNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTIPYDDLKRLGIPPPPEG 195
Query: 543 RYMARF 560
RYM+ +
Sbjct: 196 RYMSHY 201
>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 242 bits (617), Expect = 8e-62
Identities = 121/186 (65%), Positives = 134/186 (72%)
Frame = +3
Query: 3 DPFGDPKIIGDPYSTLFVGHLNHLTTEDTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFV 182
DPFGDPK GDPY TLFV L+ LTTED L K MSKYG+VKNLRLVR IVTGAS GYAFV
Sbjct: 50 DPFGDPKATGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFV 109
Query: 183 EFXXXXXXXXXXXXXXXXXXXXXXXXXXYAFVEFDSEREMRRAYQDAHHKIIDDSEIIVD 362
E+++EREMRRAY DAHH I+DDSEIIVD
Sbjct: 110 --------------------------------EYETEREMRRAYMDAHHLIVDDSEIIVD 137
Query: 363 YNRQQLMPGWIPRRFXXXXXXKKESGQLRFGGRERPFQAPIKPIPYDDLKRLGIPPPPEG 542
YNRQQLMPGWIPRR KKESGQLRFGGRE+PF+AP+KPIPY++LK+LGIPPPPEG
Sbjct: 138 YNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPYEELKKLGIPPPPEG 197
Query: 543 RYMARF 560
RYM+RF
Sbjct: 198 RYMSRF 203
>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 35 kDa protein-like
[Cucumis sativus]
Length = 333
Score = 241 bits (615), Expect = 1e-61
Identities = 119/186 (63%), Positives = 136/186 (73%)
Frame = +3
Query: 3 DPFGDPKIIGDPYSTLFVGHLNHLTTEDTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFV 182
DP GDPK+ GDPY TLFVG L+HLTTEDTL +AMSKYG+VKNLRLVRHIVTG+S GYAFV
Sbjct: 48 DPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFV 107
Query: 183 EFXXXXXXXXXXXXXXXXXXXXXXXXXXYAFVEFDSEREMRRAYQDAHHKIIDDSEIIVD 362
E+++E+EM+RAY+DAHH +IDD EIIVD
Sbjct: 108 --------------------------------EYETEKEMQRAYKDAHHSMIDDCEIIVD 135
Query: 363 YNRQQLMPGWIPRRFXXXXXXKKESGQLRFGGRERPFQAPIKPIPYDDLKRLGIPPPPEG 542
YNRQ+LM GWIPRR KKESGQLRFGGRERPF+AP++PIPYDDLKRLGI PPPEG
Sbjct: 136 YNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDDLKRLGITPPPEG 195
Query: 543 RYMARF 560
RY +RF
Sbjct: 196 RYKSRF 201
>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
ribonucleoprotein 70 kD, putative [Ricinus communis]
Length = 389
Score = 237 bits (604), Expect = 2e-60
Identities = 119/186 (63%), Positives = 134/186 (72%)
Frame = +3
Query: 3 DPFGDPKIIGDPYSTLFVGHLNHLTTEDTLHKAMSKYGKVKNLRLVRHIVTGASCGYAFV 182
DP GDPK+IGDP+ TLFVG L+H TTE+TL KAMSKYGKV+NLRLVR IVTGAS GYAFV
Sbjct: 48 DPLGDPKVIGDPFCTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFV 107
Query: 183 EFXXXXXXXXXXXXXXXXXXXXXXXXXXYAFVEFDSEREMRRAYQDAHHKIIDDSEIIVD 362
E+ +EREMRRAY DAHH IDDSEIIVD
Sbjct: 108 --------------------------------EYGTEREMRRAYMDAHHSFIDDSEIIVD 135
Query: 363 YNRQQLMPGWIPRRFXXXXXXKKESGQLRFGGRERPFQAPIKPIPYDDLKRLGIPPPPEG 542
YNRQQLMPGWIPRR +KESGQLRFGGRERPF+AP++ +P+D+LKRLGI PPPEG
Sbjct: 136 YNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQSVPFDELKRLGISPPPEG 195
Query: 543 RYMARF 560
RYM+RF
Sbjct: 196 RYMSRF 201