BLASTX nr result
ID: Cimicifuga21_contig00025867
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025867 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273712.2| PREDICTED: transcription initiation factor T... 76 2e-12 emb|CBI21835.3| unnamed protein product [Vitis vinifera] 76 2e-12 ref|XP_003533464.1| PREDICTED: transcription initiation factor T... 70 1e-10 ref|XP_003523903.1| PREDICTED: transcription initiation factor T... 70 1e-10 ref|XP_003612586.1| Transcription initiation factor TFIID subuni... 70 1e-10 >ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Vitis vinifera] Length = 2068 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 9/63 (14%) Frame = -1 Query: 447 PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295 PMDLSTI K+REDFR+DV+QI +NAH+YNDGRNPGIPPLADQ LS Sbjct: 1991 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 2050 Query: 294 QND 286 +ND Sbjct: 2051 END 2053 >emb|CBI21835.3| unnamed protein product [Vitis vinifera] Length = 1798 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 9/63 (14%) Frame = -1 Query: 447 PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295 PMDLSTI K+REDFR+DV+QI +NAH+YNDGRNPGIPPLADQ LS Sbjct: 1721 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 1780 Query: 294 QND 286 +ND Sbjct: 1781 END 1783 >ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] Length = 1910 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%) Frame = -1 Query: 447 PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295 PMDLS I K REDFR+D++QI FNAH+YNDGRNPGIPPLAD L+ Sbjct: 1833 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1892 Query: 294 QND 286 +ND Sbjct: 1893 END 1895 >ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] Length = 1919 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%) Frame = -1 Query: 447 PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295 PMDLS I K REDFR+D++QI FNAH+YNDGRNPGIPPLAD L+ Sbjct: 1842 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1901 Query: 294 QND 286 +ND Sbjct: 1902 END 1904 >ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago truncatula] gi|355513921|gb|AES95544.1| Transcription initiation factor TFIID subunit 1-A [Medicago truncatula] Length = 2196 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%) Frame = -1 Query: 447 PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295 PMDLS I K REDFR+DV+QI FNAH+YNDGRNPGIPP+AD L+ Sbjct: 2119 PMDLSKIRERVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLN 2178 Query: 294 QND 286 +ND Sbjct: 2179 END 2181