BLASTX nr result

ID: Cimicifuga21_contig00025867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025867
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...    76   2e-12
emb|CBI21835.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...    70   1e-10
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...    70   1e-10
ref|XP_003612586.1| Transcription initiation factor TFIID subuni...    70   1e-10

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 9/63 (14%)
 Frame = -1

Query: 447  PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295
            PMDLSTI         K+REDFR+DV+QI +NAH+YNDGRNPGIPPLADQ        LS
Sbjct: 1991 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 2050

Query: 294  QND 286
            +ND
Sbjct: 2051 END 2053


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/63 (61%), Positives = 45/63 (71%), Gaps = 9/63 (14%)
 Frame = -1

Query: 447  PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295
            PMDLSTI         K+REDFR+DV+QI +NAH+YNDGRNPGIPPLADQ        LS
Sbjct: 1721 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 1780

Query: 294  QND 286
            +ND
Sbjct: 1781 END 1783


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
 Frame = -1

Query: 447  PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295
            PMDLS I         K REDFR+D++QI FNAH+YNDGRNPGIPPLAD         L+
Sbjct: 1833 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1892

Query: 294  QND 286
            +ND
Sbjct: 1893 END 1895


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
 Frame = -1

Query: 447  PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295
            PMDLS I         K REDFR+D++QI FNAH+YNDGRNPGIPPLAD         L+
Sbjct: 1842 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1901

Query: 294  QND 286
            +ND
Sbjct: 1902 END 1904


>ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
            truncatula] gi|355513921|gb|AES95544.1| Transcription
            initiation factor TFIID subunit 1-A [Medicago truncatula]
          Length = 2196

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
 Frame = -1

Query: 447  PMDLSTI---------KDREDFRNDVFQINFNAHQYNDGRNPGIPPLADQXXXXXXXXLS 295
            PMDLS I         K REDFR+DV+QI FNAH+YNDGRNPGIPP+AD         L+
Sbjct: 2119 PMDLSKIRERVRNMEYKSREDFRHDVWQITFNAHKYNDGRNPGIPPVADMLLEYCDYLLN 2178

Query: 294  QND 286
            +ND
Sbjct: 2179 END 2181


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