BLASTX nr result

ID: Cimicifuga21_contig00025858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025858
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...   163   2e-38
ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation...   163   2e-38
emb|CBI29961.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   163   2e-38
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]   163   2e-38

>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 925

 Score =  163 bits (413), Expect = 2e-38
 Identities = 89/144 (61%), Positives = 102/144 (70%)
 Frame = +3

Query: 210 MASRFWVKXXXXXXXXXXXXXXXXXXXVYNTGGTKEPEETRNPYTITPDHSDDSDGERRV 389
           MASRFW +                   V  +G       T          SDDSDG++R+
Sbjct: 1   MASRFWTQGGSDSEEEESDYDEEVDTTVGESGSQAV---TSRYLQDNASDSDDSDGQKRI 57

Query: 390 VRSAKDKRSEEMSATVDHMKNAIKINDWVSLQESFDKINKQLEKVTRVTESEKVPNLYLK 569
           VRSAKDKR EEM++TVD MKNA+KINDWVSLQESFDKINKQLEKV RVTESEKVPNLY+K
Sbjct: 58  VRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPNLYIK 117

Query: 570 ALVLLEDFLSEALANKEAKKKMSS 641
           ALV+LEDFL++ALANK+AKKKMSS
Sbjct: 118 ALVMLEDFLAQALANKDAKKKMSS 141


>ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 926

 Score =  163 bits (413), Expect = 2e-38
 Identities = 90/146 (61%), Positives = 104/146 (71%), Gaps = 2/146 (1%)
 Frame = +3

Query: 210 MASRFWVKXXXXXXXXXXXXXXXXXXXVYNTGGTKEPEE--TRNPYTITPDHSDDSDGER 383
           MASRFW +                     ++ G + P +  T   +      SDDSDG++
Sbjct: 1   MASRFWTQGGSDSEEEESDYGEEDE----HSAGEQAPNQDVTSKYFVDNASDSDDSDGQK 56

Query: 384 RVVRSAKDKRSEEMSATVDHMKNAIKINDWVSLQESFDKINKQLEKVTRVTESEKVPNLY 563
           RVVRSAKDKR EEM +TVD MKNAIKINDWVSLQESFDKINKQLEKV RVTESEKVPNLY
Sbjct: 57  RVVRSAKDKRFEEMVSTVDQMKNAIKINDWVSLQESFDKINKQLEKVMRVTESEKVPNLY 116

Query: 564 LKALVLLEDFLSEALANKEAKKKMSS 641
           +KALV+L+DFL +ALANK+AKKKMSS
Sbjct: 117 IKALVMLDDFLVQALANKDAKKKMSS 142


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/94 (87%), Positives = 90/94 (95%)
 Frame = +3

Query: 360 SDDSDGERRVVRSAKDKRSEEMSATVDHMKNAIKINDWVSLQESFDKINKQLEKVTRVTE 539
           SDDSDG++RVVRSAKDKR EEMSATVD MKNA+KINDWVSLQESFDKINKQLEKV RVTE
Sbjct: 50  SDDSDGQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTE 109

Query: 540 SEKVPNLYLKALVLLEDFLSEALANKEAKKKMSS 641
           S+KVP LY+KALV+LEDFLS+ALANK+AKKKMSS
Sbjct: 110 SDKVPTLYIKALVMLEDFLSQALANKDAKKKMSS 143


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/94 (87%), Positives = 90/94 (95%)
 Frame = +3

Query: 360 SDDSDGERRVVRSAKDKRSEEMSATVDHMKNAIKINDWVSLQESFDKINKQLEKVTRVTE 539
           SDDSDG++RVVRSAKDKR EEMSATVD MKNA+KINDWVSLQESFDKINKQLEKV RVTE
Sbjct: 50  SDDSDGQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTE 109

Query: 540 SEKVPNLYLKALVLLEDFLSEALANKEAKKKMSS 641
           S+KVP LY+KALV+LEDFLS+ALANK+AKKKMSS
Sbjct: 110 SDKVPTLYIKALVMLEDFLSQALANKDAKKKMSS 143


>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
          Length = 1047

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/94 (87%), Positives = 90/94 (95%)
 Frame = +3

Query: 360 SDDSDGERRVVRSAKDKRSEEMSATVDHMKNAIKINDWVSLQESFDKINKQLEKVTRVTE 539
           SDDSDG++RVVRSAKDKR EEMSATVD MKNA+KINDWVSLQESFDKINKQLEKV RVTE
Sbjct: 50  SDDSDGQKRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTE 109

Query: 540 SEKVPNLYLKALVLLEDFLSEALANKEAKKKMSS 641
           S+KVP LY+KALV+LEDFLS+ALANK+AKKKMSS
Sbjct: 110 SDKVPTLYIKALVMLEDFLSQALANKDAKKKMSS 143


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