BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025830
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   273   3e-71
ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   247   2e-63
ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   246   5e-63
ref|XP_004153886.1| PREDICTED: uncharacterized protein LOC101209...   241   1e-61
tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]                   240   3e-61

>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  273 bits (698), Expect = 3e-71
 Identities = 157/255 (61%), Positives = 173/255 (67%), Gaps = 10/255 (3%)
 Frame = -3

Query: 783 MVKHKRSDSDEDETLYYRCPSTXXXXXXXXXXXXXXXXXGG----LAPSKSTVYVSNLDF 616
           M ++  SDS+EDETLYYR  S+                       LAPSKSTVYVSNLD+
Sbjct: 1   MGRNNNSDSEEDETLYYRYASSSIPNPNPKSNSSKLQKRSSGSGSLAPSKSTVYVSNLDY 60

Query: 615 TLTNSDLFTIFSTFGKVAKVTILKDRQTRRSRGVAFILFVSKDDACKAVNEMQGKVLNKR 436
           TLTNSDLFTIFSTFGKVAKVTILKDR TR SRGVAF+LFVS+D+A  A  EM GKVLNKR
Sbjct: 61  TLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNGKVLNKR 120

Query: 435 TLSVSIASDNGRAAEFIRRRVYKDKSKCYECGEDGHLSYECPRNQLGPRERPVPKRIRRD 256
           TL+ SIA+DNGRAAEFIRRRVYKDKS+CYECGE GHLSYECPRNQLGPRERPVPKR RR 
Sbjct: 121 TLTASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLGPRERPVPKRSRRG 180

Query: 255 QNG-----NGLIRLHXXXXXXXXXXXXXXDNWASIVDTRGADERLL-XXXXXXXXXXXXX 94
           Q G     NG                   DNWAS+VDT GAD+RLL              
Sbjct: 181 QGGSEARQNG----DHDNGGSDGGEAFEDDNWASVVDT-GADQRLLKGSEGLEMRKKGKK 235

Query: 93  XXKSSYFSDESGEDD 49
             K+SYFSDES E++
Sbjct: 236 EKKASYFSDESDEEE 250


>ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Cucumis sativus]
          Length = 261

 Score =  247 bits (630), Expect = 2e-63
 Identities = 140/256 (54%), Positives = 164/256 (64%), Gaps = 17/256 (6%)
 Frame = -3

Query: 765 SDSDEDETLYYRCPS----------------TXXXXXXXXXXXXXXXXXGGLAPSKSTVY 634
           SDSDEDET YYR PS                +                 GGL PSKST+Y
Sbjct: 13  SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLY 72

Query: 633 VSNLDFTLTNSDLFTIFSTFGKVAKVTILKDRQTRRSRGVAFILFVSKDDACKAVNEMQG 454
           VSN D++LTNSDL T+FS FGK+A+VT+LKDRQTR+SRGVAF+ F+S+DDA KA  +M G
Sbjct: 73  VSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHG 132

Query: 453 KVLNKRTLSVSIASDNGRAAEFIRRRVYKDKSKCYECGE-DGHLSYECPRNQLGPRERPV 277
           K+LN R L  +IA+DNGRAAEFIR+RVYKDKS+CYECG  DGHLSYECP+NQLGPRERP 
Sbjct: 133 KILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPE 192

Query: 276 PKRIRRDQNGNGLIRLHXXXXXXXXXXXXXXDNWASIVDTRGADERLLXXXXXXXXXXXX 97
           PKR+RR     G+   H              DNWAS+VD   AD+RLL            
Sbjct: 193 PKRVRR----GGVGARHEEDWGSDVGEGFEDDNWASVVD-GDADQRLL--TGGENIVEKK 245

Query: 96  XXXKSSYFSDESGEDD 49
              K+SYFSDES EDD
Sbjct: 246 KEKKASYFSDESDEDD 261


>ref|XP_004149837.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like isoform 1 [Cucumis sativus]
           gi|449464242|ref|XP_004149838.1| PREDICTED: zinc finger
           CCHC-type and RNA-binding motif-containing protein
           1-like isoform 2 [Cucumis sativus]
           gi|449464244|ref|XP_004149839.1| PREDICTED: zinc finger
           CCHC-type and RNA-binding motif-containing protein
           1-like isoform 3 [Cucumis sativus]
          Length = 261

 Score =  246 bits (627), Expect = 5e-63
 Identities = 140/256 (54%), Positives = 163/256 (63%), Gaps = 17/256 (6%)
 Frame = -3

Query: 765 SDSDEDETLYYRCPS----------------TXXXXXXXXXXXXXXXXXGGLAPSKSTVY 634
           SDSDEDET YYR PS                +                 GGL PSKST+Y
Sbjct: 13  SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLY 72

Query: 633 VSNLDFTLTNSDLFTIFSTFGKVAKVTILKDRQTRRSRGVAFILFVSKDDACKAVNEMQG 454
           VSN D++LTNSDL T+FS FGK+A VT+LKDRQTR+SRGVAF+ F+S+DDA KA  +M G
Sbjct: 73  VSNFDYSLTNSDLHTLFSNFGKIAHVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHG 132

Query: 453 KVLNKRTLSVSIASDNGRAAEFIRRRVYKDKSKCYECGE-DGHLSYECPRNQLGPRERPV 277
           K+LN R L  +IA+DNGRAAEFIR+RVYKDKS+CYECG  DGHLSYECP+NQLGPRERP 
Sbjct: 133 KILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPE 192

Query: 276 PKRIRRDQNGNGLIRLHXXXXXXXXXXXXXXDNWASIVDTRGADERLLXXXXXXXXXXXX 97
           PKR+RR     G+   H              DNWAS+VD   AD+RLL            
Sbjct: 193 PKRVRR----GGVGARHEEDWGSDVGEGFEDDNWASVVD-GDADQRLL--TGGENIVEKK 245

Query: 96  XXXKSSYFSDESGEDD 49
              K+SYFSDES EDD
Sbjct: 246 KEKKASYFSDESDEDD 261


>ref|XP_004153886.1| PREDICTED: uncharacterized protein LOC101209252 [Cucumis sativus]
          Length = 267

 Score =  241 bits (615), Expect = 1e-61
 Identities = 139/262 (53%), Positives = 163/262 (62%), Gaps = 23/262 (8%)
 Frame = -3

Query: 765 SDSDEDETLYYRCPS----------------------TXXXXXXXXXXXXXXXXXGGLAP 652
           SDSDEDET YYR PS                      +                 GGL P
Sbjct: 13  SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVP 72

Query: 651 SKSTVYVSNLDFTLTNSDLFTIFSTFGKVAKVTILKDRQTRRSRGVAFILFVSKDDACKA 472
           SKST+ VSN D++LTNSDL T+FS FGK+A+VT+LKDRQTR+SRGVAF+ F+S+DDA KA
Sbjct: 73  SKSTLCVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA 132

Query: 471 VNEMQGKVLNKRTLSVSIASDNGRAAEFIRRRVYKDKSKCYECGE-DGHLSYECPRNQLG 295
             +M GK+LN R L  +IA+DNGRAAEFIR+RVYKDKS+CYECG  DGHLSYECP+NQLG
Sbjct: 133 AKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLG 192

Query: 294 PRERPVPKRIRRDQNGNGLIRLHXXXXXXXXXXXXXXDNWASIVDTRGADERLLXXXXXX 115
           PRERP PKR+RR     G+   H              DNWAS+VD   AD+RLL      
Sbjct: 193 PRERPEPKRVRR----GGVGARHEEDWGSDVGEGFEDDNWASVVD-GDADQRLL--TGGE 245

Query: 114 XXXXXXXXXKSSYFSDESGEDD 49
                    K+SYFSDES EDD
Sbjct: 246 NIVENKKEKKASYFSDESDEDD 267


>tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
          Length = 261

 Score =  240 bits (612), Expect = 3e-61
 Identities = 138/251 (54%), Positives = 158/251 (62%), Gaps = 12/251 (4%)
 Frame = -3

Query: 765 SDSDEDETLY-YRCPSTXXXXXXXXXXXXXXXXXGGLAPSKSTVYVSNLDFTLTNSDLFT 589
           SD ++D  LY Y  PS                  GGLAPSKSTVYVSNLDF LTNSDL  
Sbjct: 11  SDGEDDSFLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPSKSTVYVSNLDFALTNSDLHL 70

Query: 588 IFSTFGKVAKVTILKDRQTRRSRGVAFILFVSKDDACKAVNEMQGKVLNKRTLSVSIASD 409
           +FS FG+VA+VT+LKDR++RRSRGVAF+LFVS++DA  A  EM GKVLN RTLS SIA+D
Sbjct: 71  LFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLSASIAAD 130

Query: 408 NGRAAEFIRRRVYKDKSKCYECGEDGHLSYECPRNQLGPRERPVP-KRIRRDQNGNGLIR 232
           NGRAAEFIRRRVY+DKS+CYECGE+GHLSYECPRNQLGPRERP P K+ RR   G G  R
Sbjct: 131 NGRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGGGGGGGR 190

Query: 231 LHXXXXXXXXXXXXXXD----------NWASIVDTRGADERLLXXXXXXXXXXXXXXXKS 82
                           D           WAS+VDTR  +E+                 + 
Sbjct: 191 GRGRGGQADWHSDDDEDAAAAVAFEDDKWASVVDTREVEEK-AAGKGEGMGKAARREKRK 249

Query: 81  SYFSDESGEDD 49
            YFSDES EDD
Sbjct: 250 CYFSDESDEDD 260