BLASTX nr result

ID: Cimicifuga21_contig00025814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025814
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   154   6e-36
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   153   2e-35
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              153   2e-35
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   153   2e-35
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   147   7e-34

>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  154 bits (390), Expect = 6e-36
 Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 9/142 (6%)
 Frame = +2

Query: 2   GVFGKKQGERSLLLQPLLNNSGD-GRYD--------TESPFSNASFFSILTFSWMNPLLA 154
           G  GK QGE S+L +PLLN S    R +        T +PFS A FFS+LTFSW+ PL+A
Sbjct: 175 GFLGKNQGEESILREPLLNGSTSISRVESNKSKGEATVTPFSKAGFFSLLTFSWIGPLIA 234

Query: 155 VGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREVL 334
            GNKKT+DL+DVPQLD+  +V GVFP F NKL   +  S  V+TLKLVKAL+FA W E+L
Sbjct: 235 EGNKKTLDLEDVPQLDTSNSVAGVFPAFSNKLQCDSGGSSGVTTLKLVKALIFACWAEIL 294

Query: 335 LTGLLCFLYTIASYVGPYLIDT 400
           LT  L  + T+ASYVGPYLIDT
Sbjct: 295 LTAFLVLVKTLASYVGPYLIDT 316


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/143 (54%), Positives = 100/143 (69%), Gaps = 10/143 (6%)
 Frame = +2

Query: 2   GVFGKKQGERSLLLQPLLNNSGD----------GRYDTESPFSNASFFSILTFSWMNPLL 151
           G++GK QGE S+L + LL+ S               +T +PFSNA  FS+LTFSWM PL+
Sbjct: 181 GLWGKNQGEESILRESLLHGSASISTRVASNKSKGEETVTPFSNAGVFSLLTFSWMGPLI 240

Query: 152 AVGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREV 331
           A+GNKKT+DL+DVPQLD+V +V G FPIFR+KL         V+TLKLVKA++ + W E+
Sbjct: 241 ALGNKKTLDLEDVPQLDAVNSVVGGFPIFRSKLEGDGGGGSGVTTLKLVKAMILSAWAEI 300

Query: 332 LLTGLLCFLYTIASYVGPYLIDT 400
           LL+ L   LYT+ASYVGPYLIDT
Sbjct: 301 LLSALFALLYTLASYVGPYLIDT 323


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/143 (54%), Positives = 100/143 (69%), Gaps = 10/143 (6%)
 Frame = +2

Query: 2   GVFGKKQGERSLLLQPLLNNSGD----------GRYDTESPFSNASFFSILTFSWMNPLL 151
           G++GK QGE S+L + LL+ S               +T +PFSNA  FS+LTFSWM PL+
Sbjct: 60  GLWGKNQGEESILRESLLHGSASISTRVASNKSKGEETVTPFSNAGVFSLLTFSWMGPLI 119

Query: 152 AVGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREV 331
           A+GNKKT+DL+DVPQLD+V +V G FPIFR+KL         V+TLKLVKA++ + W E+
Sbjct: 120 ALGNKKTLDLEDVPQLDAVNSVVGGFPIFRSKLEGDGGGGSGVTTLKLVKAMILSAWAEI 179

Query: 332 LLTGLLCFLYTIASYVGPYLIDT 400
           LL+ L   LYT+ASYVGPYLIDT
Sbjct: 180 LLSALFALLYTLASYVGPYLIDT 202


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/143 (54%), Positives = 100/143 (69%), Gaps = 10/143 (6%)
 Frame = +2

Query: 2   GVFGKKQGERSLLLQPLLNNSGD----------GRYDTESPFSNASFFSILTFSWMNPLL 151
           G++GK QGE S+L + LL+ S               +T +PFSNA  FS+LTFSWM PL+
Sbjct: 175 GLWGKNQGEESILRESLLHGSASISTRVASNKSKGEETVTPFSNAGVFSLLTFSWMGPLI 234

Query: 152 AVGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREV 331
           A+GNKKT+DL+DVPQLD+V +V G FPIFR+KL         V+TLKLVKA++ + W E+
Sbjct: 235 ALGNKKTLDLEDVPQLDAVNSVVGGFPIFRSKLEGDGGGGSGVTTLKLVKAMILSAWAEI 294

Query: 332 LLTGLLCFLYTIASYVGPYLIDT 400
           LL+ L   LYT+ASYVGPYLIDT
Sbjct: 295 LLSALFALLYTLASYVGPYLIDT 317


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  147 bits (372), Expect = 7e-34
 Identities = 80/142 (56%), Positives = 98/142 (69%), Gaps = 9/142 (6%)
 Frame = +2

Query: 2   GVFGKKQGERSLLLQPLLNN--------SGDGR-YDTESPFSNASFFSILTFSWMNPLLA 154
           G  GK QG+ S+L +PLLN         S + +  +T +PFS A FFS+LTFSW+ PL+A
Sbjct: 175 GFLGKNQGKESILREPLLNGGTSISIVESDESKGEETVTPFSKAGFFSLLTFSWIGPLIA 234

Query: 155 VGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREVL 334
            GNKKT+DL DVPQLD+  +V  VFP FRNKL      S+ V+TLKLVKAL+FA W E+L
Sbjct: 235 EGNKKTLDLGDVPQLDTSNSVVAVFPAFRNKLQCDCGGSNGVTTLKLVKALIFAFWAEIL 294

Query: 335 LTGLLCFLYTIASYVGPYLIDT 400
           LT L   L  +ASYVGPYLIDT
Sbjct: 295 LTALFLLLDILASYVGPYLIDT 316



 Score =  132 bits (331), Expect = 4e-29
 Identities = 71/125 (56%), Positives = 86/125 (68%), Gaps = 9/125 (7%)
 Frame = +2

Query: 2    GVFGKKQGERSLLLQPLLNNSGD-GRYD--------TESPFSNASFFSILTFSWMNPLLA 154
            G  GK QGE S+L +PLLN S    R +        T +PFS ASFFS+LTFSW+ PL+A
Sbjct: 1120 GFLGKNQGEESILREPLLNGSTSISRVESNKSKGEATVTPFSKASFFSLLTFSWIGPLIA 1179

Query: 155  VGNKKTIDLQDVPQLDSVVTVNGVFPIFRNKLYSFNSNSDQVSTLKLVKALLFATWREVL 334
             GNKKT+DL+DVPQLD+  +V GVFP F NKL   +  S  V+TLKLVKAL+FA W E+L
Sbjct: 1180 EGNKKTLDLEDVPQLDTSNSVAGVFPAFSNKLQCDSGGSSGVTTLKLVKALIFACWAEIL 1239

Query: 335  LTGLL 349
            LT  L
Sbjct: 1240 LTAFL 1244


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