BLASTX nr result
ID: Cimicifuga21_contig00025807
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025807 (487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23729.3| unnamed protein product [Vitis vinifera] 159 2e-37 ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266... 159 2e-37 ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2... 149 2e-34 gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] 148 5e-34 ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 147 1e-33 >emb|CBI23729.3| unnamed protein product [Vitis vinifera] Length = 1114 Score = 159 bits (402), Expect = 2e-37 Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 2/101 (1%) Frame = +2 Query: 2 PPPSTIGASSVYVLFRADKKLYVGQSDDLEGRVRAHRAKEG--NVSFIYMIVPGKSIACQ 175 PPPSTIGASSVYVLF DKKLYVG++DDLEGRVRAHR+KEG SF+Y +VPGKS+ACQ Sbjct: 1014 PPPSTIGASSVYVLFSTDKKLYVGETDDLEGRVRAHRSKEGMQKASFLYFVVPGKSLACQ 1073 Query: 176 LETLVINQLPHHGFQLTNLADGKHRNFGTSNRSIESLTLHQ 298 LETL+INQLP GFQL N ADGKHRNFGT + S+E +TLHQ Sbjct: 1074 LETLLINQLPVQGFQLVNRADGKHRNFGTLDHSVEVVTLHQ 1114 >ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera] Length = 1144 Score = 159 bits (402), Expect = 2e-37 Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 2/101 (1%) Frame = +2 Query: 2 PPPSTIGASSVYVLFRADKKLYVGQSDDLEGRVRAHRAKEG--NVSFIYMIVPGKSIACQ 175 PPPSTIGASSVYVLF DKKLYVG++DDLEGRVRAHR+KEG SF+Y +VPGKS+ACQ Sbjct: 1044 PPPSTIGASSVYVLFSTDKKLYVGETDDLEGRVRAHRSKEGMQKASFLYFVVPGKSLACQ 1103 Query: 176 LETLVINQLPHHGFQLTNLADGKHRNFGTSNRSIESLTLHQ 298 LETL+INQLP GFQL N ADGKHRNFGT + S+E +TLHQ Sbjct: 1104 LETLLINQLPVQGFQLVNRADGKHRNFGTLDHSVEVVTLHQ 1144 >ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1| predicted protein [Populus trichocarpa] Length = 1130 Score = 149 bits (376), Expect = 2e-34 Identities = 71/100 (71%), Positives = 86/100 (86%), Gaps = 2/100 (2%) Frame = +2 Query: 2 PPPSTIGASSVYVLFRADKKLYVGQSDDLEGRVRAHRAKEG--NVSFIYMIVPGKSIACQ 175 PPPSTI AS VYV+ R DKKLYVG +DDLE R+R+HR+KEG N +F+Y IVPGKSIAC Sbjct: 1031 PPPSTISASCVYVMLRPDKKLYVGVTDDLESRIRSHRSKEGMDNAAFLYFIVPGKSIACL 1090 Query: 176 LETLVINQLPHHGFQLTNLADGKHRNFGTSNRSIESLTLH 295 LETL+INQLP GF+LTN++DGKHRNFGT+N S+ES+T+H Sbjct: 1091 LETLLINQLPIKGFKLTNVSDGKHRNFGTTNLSLESVTVH 1130 >gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] Length = 1124 Score = 148 bits (373), Expect = 5e-34 Identities = 71/88 (80%), Positives = 79/88 (89%), Gaps = 2/88 (2%) Frame = +2 Query: 2 PPPSTIGASSVYVLFRADKKLYVGQSDDLEGRVRAHRAKEG--NVSFIYMIVPGKSIACQ 175 P PSTIGASSVY++ R DKKLYVGQ+DDLEGRVRAHR KEG N SF+Y +V GKSIACQ Sbjct: 1037 PAPSTIGASSVYIMLRPDKKLYVGQTDDLEGRVRAHRLKEGMENASFLYFLVSGKSIACQ 1096 Query: 176 LETLVINQLPHHGFQLTNLADGKHRNFG 259 LETL+INQLP+HGFQLTN+ADGKHRNFG Sbjct: 1097 LETLLINQLPNHGFQLTNVADGKHRNFG 1124 >ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1, mitochondrial-like, partial [Cucumis sativus] Length = 675 Score = 147 bits (370), Expect = 1e-33 Identities = 68/99 (68%), Positives = 87/99 (87%), Gaps = 2/99 (2%) Frame = +2 Query: 2 PPPSTIGASSVYVLFRADKKLYVGQSDDLEGRVRAHRAKEG--NVSFIYMIVPGKSIACQ 175 PPPSTIGASSVYV+ R D K YVGQ+DDL+GRV++HR KEG + +F+Y++VPGKS+ACQ Sbjct: 575 PPPSTIGASSVYVILRPDGKFYVGQTDDLDGRVQSHRLKEGMRDAAFLYLMVPGKSLACQ 634 Query: 176 LETLVINQLPHHGFQLTNLADGKHRNFGTSNRSIESLTL 292 LETL+IN+LP HGFQLTN+ADGKHRNFGT+N +++T+ Sbjct: 635 LETLLINRLPDHGFQLTNVADGKHRNFGTANLLSDNVTV 673