BLASTX nr result

ID: Cimicifuga21_contig00025794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025794
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77118.1| unknown [Picea sitchensis]                              90   2e-16
ref|XP_002963045.1| hypothetical protein SELMODRAFT_404578 [Sela...    89   5e-16
ref|XP_001780765.1| predicted protein [Physcomitrella patens sub...    87   1e-15
ref|YP_007171680.1| integral membrane protein MviN [Dactylococco...    78   7e-13
ref|NP_442249.1| hypothetical protein slr0488 [Synechocystis sp....    75   6e-12

>gb|ADE77118.1| unknown [Picea sitchensis]
          Length = 223

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/72 (56%), Positives = 57/72 (79%)
 Frame = -3

Query: 219 LQNAAWIGAATVASKILGLLREITLASIFGVGPVVTAFKHASVLPGFCMSVLGGVNGPIH 40
           L++ + IG AT +SKILGLLRE  LA+ FG+GPV T+F +AS++P F +S+LGG+NGP+H
Sbjct: 125 LKSISIIGVATASSKILGLLRETVLAAAFGIGPVTTSFNYASIIPAFFISLLGGINGPLH 184

Query: 39  LTMATTLSFQRK 4
           +T+ TTLS   K
Sbjct: 185 MTITTTLSKHSK 196


>ref|XP_002963045.1| hypothetical protein SELMODRAFT_404578 [Selaginella moellendorffii]
           gi|300169906|gb|EFJ36508.1| hypothetical protein
           SELMODRAFT_404578 [Selaginella moellendorffii]
          Length = 148

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/62 (61%), Positives = 53/62 (85%)
 Frame = -3

Query: 201 IGAATVASKILGLLREITLASIFGVGPVVTAFKHASVLPGFCMSVLGGVNGPIHLTMATT 22
           IG+AT  SK+LGL+RE+ LA++FGVGPVV AF++AS++PGF + +LGG+NGPIH+ M + 
Sbjct: 26  IGSATALSKVLGLVRELVLAAVFGVGPVVDAFRYASIVPGFFLIILGGINGPIHIAMVSA 85

Query: 21  LS 16
           LS
Sbjct: 86  LS 87


>ref|XP_001780765.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667783|gb|EDQ54404.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 761

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 9/94 (9%)
 Frame = -3

Query: 258 VVFDSSKNEVSQSL---------QNAAWIGAATVASKILGLLREITLASIFGVGPVVTAF 106
           VV   S++  S+ L         Q A  IGAAT+ SK++GL RE  LA+++GVGPV+ AF
Sbjct: 166 VVLTDSESTTSECLASSSERGLFQIAGLIGAATLVSKVIGLAREAALAAVYGVGPVMNAF 225

Query: 105 KHASVLPGFCMSVLGGVNGPIHLTMATTLSFQRK 4
            +AS++PGF +++LGG+NGP H  M   LS +RK
Sbjct: 226 NYASIVPGFFLTMLGGINGPFHSAMTAALSKRRK 259


>ref|YP_007171680.1| integral membrane protein MviN [Dactylococcopsis salina PCC 8305]
           gi|428694173|gb|AFZ50323.1| integral membrane protein
           MviN [Dactylococcopsis salina PCC 8305]
          Length = 537

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -3

Query: 246 SSKNEVSQSLQNAAWIGA-ATVASKILGLLREITLASIFGVGPVVTAFKHASVLPGFCMS 70
           S KN   +SL N A I A AT+ SK+ GL+RE  +A+ FGVGPVV A+ +A ++PGF + 
Sbjct: 2   SEKNASRRSLANIAGIVAIATLISKVFGLVREQVIAAAFGVGPVVNAYAYAYIIPGFLLI 61

Query: 69  VLGGVNGPIHLTMATTLSFQRK 4
           +LGG+NGP H  + + LS + K
Sbjct: 62  LLGGINGPFHSALVSVLSKRDK 83


>ref|NP_442249.1| hypothetical protein slr0488 [Synechocystis sp. PCC 6803]
           gi|383323263|ref|YP_005384117.1| hypothetical protein
           SYNGTI_2355 [Synechocystis sp. PCC 6803 substr. GT-I]
           gi|383326432|ref|YP_005387286.1| hypothetical protein
           SYNPCCP_2354 [Synechocystis sp. PCC 6803 substr. PCC-P]
           gi|383492316|ref|YP_005409993.1| hypothetical protein
           SYNPCCN_2354 [Synechocystis sp. PCC 6803 substr. PCC-N]
           gi|384437584|ref|YP_005652309.1| hypothetical protein
           SYNGTS_2356 [Synechocystis sp. PCC 6803]
           gi|451815673|ref|YP_007452125.1| hypothetical protein
           MYO_123800 [Synechocystis sp. PCC 6803]
           gi|7387921|sp|Q55179.1|MURJ_SYNY3 RecName: Full=Protein
           MurJ homolog gi|1001176|dbj|BAA10319.1| slr0488
           [Synechocystis sp. PCC 6803]
           gi|339274617|dbj|BAK51104.1| hypothetical protein
           SYNGTS_2356 [Synechocystis sp. PCC 6803]
           gi|359272583|dbj|BAL30102.1| hypothetical protein
           SYNGTI_2355 [Synechocystis sp. PCC 6803 substr. GT-I]
           gi|359275753|dbj|BAL33271.1| hypothetical protein
           SYNPCCN_2354 [Synechocystis sp. PCC 6803 substr. PCC-N]
           gi|359278923|dbj|BAL36440.1| hypothetical protein
           SYNPCCP_2354 [Synechocystis sp. PCC 6803 substr. PCC-P]
           gi|407961091|dbj|BAM54331.1| hypothetical protein
           BEST7613_5400 [Bacillus subtilis BEST7613]
           gi|451781642|gb|AGF52611.1| hypothetical protein
           MYO_123800 [Synechocystis sp. PCC 6803]
          Length = 533

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -3

Query: 246 SSKNEVSQSLQNAAWIGA-ATVASKILGLLREITLASIFGVGPVVTAFKHASVLPGFCMS 70
           S   + S+SL N A I A AT+ SK+ GLLRE  +A+ FGVG VVTA+ +A V+PGF   
Sbjct: 2   SPSGKSSRSLANIAGIVAIATLISKVFGLLREQIIAAAFGVGTVVTAYAYAYVIPGFLFI 61

Query: 69  VLGGVNGPIHLTMATTLS 16
           +LGG+NGP H  + + LS
Sbjct: 62  LLGGINGPFHSALVSVLS 79


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