BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025781
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   201   4e-50
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   201   4e-50
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   199   2e-49
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           199   3e-49
gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]     198   3e-49

>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  201 bits (512), Expect = 4e-50
 Identities = 94/134 (70%), Positives = 112/134 (83%)
 Frame = -2

Query: 405  TNAPAFFMDLMNRLFRPYLDKFVVIFIDDILVYSRTEEEHRHHLRTVLSILKEQRLYAKY 226
            TNAPA FMDLMNR+FRPYLD FV+IFIDDIL+YSR EE+H  HLRTVL  LK++ LYAK+
Sbjct: 791  TNAPAAFMDLMNRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKF 850

Query: 225  SKCRFWEKEVRFLGYVISQEGISVDPEKVVAVKEWKRPTNATEIRSFLGLAGYYKRFIEK 46
            SKC FW K V FLG+++S +GI VD  K+ AV+ W RPT+ TEIRSFLGLAGYY+RF+E 
Sbjct: 851  SKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEG 910

Query: 45   FSIIAAPLTKLTRK 4
            FS IA+PLTKLT+K
Sbjct: 911  FSSIASPLTKLTQK 924


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  201 bits (512), Expect = 4e-50
 Identities = 94/134 (70%), Positives = 112/134 (83%)
 Frame = -2

Query: 405  TNAPAFFMDLMNRLFRPYLDKFVVIFIDDILVYSRTEEEHRHHLRTVLSILKEQRLYAKY 226
            TNAPA FMDLMNR+FRPYLD FV+IFIDDIL+YSR EE+H  HLRTVL  LK++ LYAK+
Sbjct: 785  TNAPAAFMDLMNRVFRPYLDMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKF 844

Query: 225  SKCRFWEKEVRFLGYVISQEGISVDPEKVVAVKEWKRPTNATEIRSFLGLAGYYKRFIEK 46
            SKC FW K V FLG+++S +GI VD  K+ AV+ W RPT+ TEIRSFLGLAGYY+RF+E 
Sbjct: 845  SKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEG 904

Query: 45   FSIIAAPLTKLTRK 4
            FS IA+PLTKLT+K
Sbjct: 905  FSSIASPLTKLTQK 918


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/135 (68%), Positives = 112/135 (82%)
 Frame = -2

Query: 405 TNAPAFFMDLMNRLFRPYLDKFVVIFIDDILVYSRTEEEHRHHLRTVLSILKEQRLYAKY 226
           TNAP+ FMDLM R+F PYLDKFVV+FIDDIL+YS+ E+EH  HLR VL  LKE++LYAK+
Sbjct: 340 TNAPSAFMDLMQRVFMPYLDKFVVVFIDDILIYSKDEKEHEEHLRIVLQTLKEKKLYAKF 399

Query: 225 SKCRFWEKEVRFLGYVISQEGISVDPEKVVAVKEWKRPTNATEIRSFLGLAGYYKRFIEK 46
           SKC FW K+V FLG+VIS +GI VDP K+ AV +W RPT  TEIRSFLGLAGYY++F++ 
Sbjct: 400 SKCEFWLKQVSFLGHVISGDGIQVDPAKIEAVSKWPRPTTVTEIRSFLGLAGYYRKFVQD 459

Query: 45  FSIIAAPLTKLTRKN 1
           FS IA PLT+LT+KN
Sbjct: 460 FSKIATPLTRLTQKN 474


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/134 (68%), Positives = 112/134 (83%)
 Frame = -2

Query: 405  TNAPAFFMDLMNRLFRPYLDKFVVIFIDDILVYSRTEEEHRHHLRTVLSILKEQRLYAKY 226
            TNAPA FMDLMNR+F+PYLD FV++FIDDILVYSR EE+H  HLRTVL  LK+ +LYAK+
Sbjct: 870  TNAPAAFMDLMNRVFKPYLDTFVIVFIDDILVYSRNEEDHASHLRTVLQTLKDNKLYAKF 929

Query: 225  SKCRFWEKEVRFLGYVISQEGISVDPEKVVAVKEWKRPTNATEIRSFLGLAGYYKRFIEK 46
            SKC FW K V FLG+++S +GI VD  K+ A++ W RPT+ TEIRSFLGLAGYY+RF+E 
Sbjct: 930  SKCEFWLKSVAFLGHIVSGDGIKVDTGKIEAMQNWPRPTSPTEIRSFLGLAGYYRRFVEG 989

Query: 45   FSIIAAPLTKLTRK 4
            FS IA+PLTKLT+K
Sbjct: 990  FSSIASPLTKLTQK 1003


>gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1498

 Score =  198 bits (504), Expect = 3e-49
 Identities = 92/134 (68%), Positives = 113/134 (84%)
 Frame = -2

Query: 405  TNAPAFFMDLMNRLFRPYLDKFVVIFIDDILVYSRTEEEHRHHLRTVLSILKEQRLYAKY 226
            TNAPAFFM+LMN++F  YLDKFVV+FIDDIL+YS+TEE+H+HHLR VL  L+E +LYAK 
Sbjct: 688  TNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQTEEDHQHHLRLVLGKLREHQLYAKL 747

Query: 225  SKCRFWEKEVRFLGYVISQEGISVDPEKVVAVKEWKRPTNATEIRSFLGLAGYYKRFIEK 46
            SKC FW  EV+FLG+VIS +G++VDPE V AV EWK+P   T+IRSFLGLAGYY+RFIE 
Sbjct: 748  SKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTEWKQPKTVTQIRSFLGLAGYYRRFIEN 807

Query: 45   FSIIAAPLTKLTRK 4
            FS IA P+T+L +K
Sbjct: 808  FSKIARPMTQLLKK 821