BLASTX nr result

ID: Cimicifuga21_contig00025778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025778
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reduct...   205   4e-51
ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct...   205   6e-51
dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]                       198   5e-49
ref|NP_195183.2| thymidylate synthase [Arabidopsis thaliana] gi|...   198   7e-49
gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Ara...   198   7e-49

>ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 530

 Score =  205 bits (522), Expect = 4e-51
 Identities = 98/117 (83%), Positives = 108/117 (92%)
 Frame = +2

Query: 2   FAQFYVANGGELSCQIYQRSADMGLGVPFNIASYSLLTCMIANVCGLVPGEFVYVISDAH 181
           FAQFYVANG ELSCQ+YQRSADMGLGVPFNIASY+LLTCMIA+VC LVPG+F++VI DAH
Sbjct: 415 FAQFYVANG-ELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAH 473

Query: 182 VYKTHTRPLQEQLQNHPKPFPILKINPLKKDIDSFVTSDFKLVGYEPHQ*IEMKMAV 352
           VY+ H RPLQEQLQN PKPFPILKINP KKDIDSFV +DFKL+GY+PHQ IEMKMAV
Sbjct: 474 VYRNHVRPLQEQLQNQPKPFPILKINPKKKDIDSFVAADFKLIGYDPHQKIEMKMAV 530


>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 528

 Score =  205 bits (521), Expect = 6e-51
 Identities = 99/117 (84%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   FAQFYVANGGELSCQIYQRSADMGLGVPFNIASYSLLTCMIANVCGLVPGEFVYVISDAH 181
           FAQFYVANG ELSCQ+YQRSADMGLGVPFNIASY+LLTCMIA+VC LVPG+F++VI DAH
Sbjct: 413 FAQFYVANG-ELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAH 471

Query: 182 VYKTHTRPLQEQLQNHPKPFPILKINPLKKDIDSFVTSDFKLVGYEPHQ*IEMKMAV 352
           VY+ H RPLQEQLQN PKPFPILKINP KKDIDSFV SDFKL+GY PHQ IEMKMAV
Sbjct: 472 VYRNHVRPLQEQLQNQPKPFPILKINPKKKDIDSFVASDFKLIGYVPHQKIEMKMAV 528


>dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus]
          Length = 528

 Score =  198 bits (504), Expect = 5e-49
 Identities = 94/117 (80%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   FAQFYVANGGELSCQIYQRSADMGLGVPFNIASYSLLTCMIANVCGLVPGEFVYVISDAH 181
           FAQFYVANG ELSCQ+YQRSADMGLGVPFNIASY+LLTCMIA+VC LVPG+F++VI DAH
Sbjct: 413 FAQFYVANG-ELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAH 471

Query: 182 VYKTHTRPLQEQLQNHPKPFPILKINPLKKDIDSFVTSDFKLVGYEPHQ*IEMKMAV 352
           VY+ H +PLQEQLQN P+PFPILKINP KKDIDSF  +DFKL+GY+PHQ I+MKMAV
Sbjct: 472 VYRNHVKPLQEQLQNLPRPFPILKINPKKKDIDSFEATDFKLIGYDPHQKIQMKMAV 528


>ref|NP_195183.2| thymidylate synthase [Arabidopsis thaliana]
           gi|150421542|sp|Q05763.2|DRTS2_ARATH RecName:
           Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase 2; Short=DHFR-TS 2; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase gi|110743754|dbj|BAE99713.1|
           dihydrofolate reductase-thymidylate synthase
           [Arabidopsis thaliana] gi|332660994|gb|AEE86394.1|
           thymidylate synthase [Arabidopsis thaliana]
          Length = 565

 Score =  198 bits (503), Expect = 7e-49
 Identities = 93/117 (79%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   FAQFYVANGGELSCQIYQRSADMGLGVPFNIASYSLLTCMIANVCGLVPGEFVYVISDAH 181
           FAQFYVANG ELSCQ+YQRSADMGLGVPFNIASYSLLTC++A+VC LVPG+F++VI DAH
Sbjct: 450 FAQFYVANG-ELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAH 508

Query: 182 VYKTHTRPLQEQLQNHPKPFPILKINPLKKDIDSFVTSDFKLVGYEPHQ*IEMKMAV 352
           VYK H RPLQEQL+N PKPFP+LKINP KKDIDSFV  DF+L+GY+PH+ I+MKMAV
Sbjct: 509 VYKNHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 565


>gb|AAA32789.1| dihydrofolate reductase-thymidylate synthase [Arabidopsis thaliana]
           gi|3096926|emb|CAA18836.1| dihydrofolate
           reductase-thymidylate synthase [Arabidopsis thaliana]
           gi|7270407|emb|CAB80174.1| dihydrofolate
           reductase-thymidylate synthase [Arabidopsis thaliana]
           gi|27808622|gb|AAO24591.1| At4g34570 [Arabidopsis
           thaliana]
          Length = 518

 Score =  198 bits (503), Expect = 7e-49
 Identities = 93/117 (79%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   FAQFYVANGGELSCQIYQRSADMGLGVPFNIASYSLLTCMIANVCGLVPGEFVYVISDAH 181
           FAQFYVANG ELSCQ+YQRSADMGLGVPFNIASYSLLTC++A+VC LVPG+F++VI DAH
Sbjct: 403 FAQFYVANG-ELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDLVPGDFIHVIGDAH 461

Query: 182 VYKTHTRPLQEQLQNHPKPFPILKINPLKKDIDSFVTSDFKLVGYEPHQ*IEMKMAV 352
           VYK H RPLQEQL+N PKPFP+LKINP KKDIDSFV  DF+L+GY+PH+ I+MKMAV
Sbjct: 462 VYKNHVRPLQEQLENPPKPFPVLKINPEKKDIDSFVADDFELIGYDPHKKIDMKMAV 518


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