BLASTX nr result

ID: Cimicifuga21_contig00025731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025731
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255...   268   1e-69
emb|CBI32095.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002534526.1| conserved hypothetical protein [Ricinus comm...   263   4e-68
ref|XP_002436771.1| hypothetical protein SORBIDRAFT_10g008490 [S...   254   1e-65
ref|NP_001146539.1| nucleic acid binding protein [Zea mays] gi|2...   254   2e-65

>ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255243 [Vitis vinifera]
          Length = 453

 Score =  268 bits (685), Expect = 1e-69
 Identities = 124/166 (74%), Positives = 145/166 (87%)
 Frame = +3

Query: 201 GEDIIFTEEPAAAPKTAVFPSLLQPRVVVYDGVCHLCHAGVKWVINADKHNKIKFCCLQS 380
           G+D++    P   P   + P+LLQPRVVVYDGVCHLCH GVK VI ADKH KIKFCCLQS
Sbjct: 286 GDDLLLQHSPPP-PVKPLIPTLLQPRVVVYDGVCHLCHQGVKRVIAADKHRKIKFCCLQS 344

Query: 381 RAAEPYLRACGVDREDVLRRFVFVEGPDLYHEASTAALKVASYLPLPYSALSTLLIVPTP 560
           +AAEPYLR CG+DREDVLRRF+F+EGP LYH+ASTAAL+V SYLPLPYSALSTLLI+PTP
Sbjct: 345 KAAEPYLRVCGLDREDVLRRFLFIEGPGLYHQASTAALRVLSYLPLPYSALSTLLIIPTP 404

Query: 561 LRDAVYDYVAKNRYKWFGKDDDCIVLREMELLERFIDREEMVEKNR 698
           LRDA+YDYVAK RY WFGK++DC+VL+E E+LERFIDREEM+++NR
Sbjct: 405 LRDAIYDYVAKRRYDWFGKEEDCLVLKEKEMLERFIDREEMLDQNR 450


>emb|CBI32095.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  268 bits (685), Expect = 1e-69
 Identities = 124/166 (74%), Positives = 145/166 (87%)
 Frame = +3

Query: 201 GEDIIFTEEPAAAPKTAVFPSLLQPRVVVYDGVCHLCHAGVKWVINADKHNKIKFCCLQS 380
           G+D++    P   P   + P+LLQPRVVVYDGVCHLCH GVK VI ADKH KIKFCCLQS
Sbjct: 49  GDDLLLQHSPPP-PVKPLIPTLLQPRVVVYDGVCHLCHQGVKRVIAADKHRKIKFCCLQS 107

Query: 381 RAAEPYLRACGVDREDVLRRFVFVEGPDLYHEASTAALKVASYLPLPYSALSTLLIVPTP 560
           +AAEPYLR CG+DREDVLRRF+F+EGP LYH+ASTAAL+V SYLPLPYSALSTLLI+PTP
Sbjct: 108 KAAEPYLRVCGLDREDVLRRFLFIEGPGLYHQASTAALRVLSYLPLPYSALSTLLIIPTP 167

Query: 561 LRDAVYDYVAKNRYKWFGKDDDCIVLREMELLERFIDREEMVEKNR 698
           LRDA+YDYVAK RY WFGK++DC+VL+E E+LERFIDREEM+++NR
Sbjct: 168 LRDAIYDYVAKRRYDWFGKEEDCLVLKEKEMLERFIDREEMLDQNR 213


>ref|XP_002534526.1| conserved hypothetical protein [Ricinus communis]
           gi|223525107|gb|EEF27856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  263 bits (672), Expect = 4e-68
 Identities = 120/154 (77%), Positives = 136/154 (88%)
 Frame = +3

Query: 225 EPAAAPKTAVFPSLLQPRVVVYDGVCHLCHAGVKWVINADKHNKIKFCCLQSRAAEPYLR 404
           + +  P     P+LLQPRVVVYDGVCHLCH GVKWVI ADK+ KIKFCCLQS+AAEPYLR
Sbjct: 59  DASTLPSPVTLPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKIKFCCLQSKAAEPYLR 118

Query: 405 ACGVDREDVLRRFVFVEGPDLYHEASTAALKVASYLPLPYSALSTLLIVPTPLRDAVYDY 584
            CG+DR+DVLRRF+F+EGPDLYH+ASTAAL+V SYLPLPYSALSTLLI+PTPLRDAVYDY
Sbjct: 119 LCGLDRDDVLRRFLFIEGPDLYHQASTAALRVVSYLPLPYSALSTLLIIPTPLRDAVYDY 178

Query: 585 VAKNRYKWFGKDDDCIVLREMELLERFIDREEMV 686
           VAK RY WFGK DDC+VL++ ELLERFIDR EM+
Sbjct: 179 VAKGRYNWFGKADDCLVLKDKELLERFIDRGEMM 212


>ref|XP_002436771.1| hypothetical protein SORBIDRAFT_10g008490 [Sorghum bicolor]
           gi|241914994|gb|EER88138.1| hypothetical protein
           SORBIDRAFT_10g008490 [Sorghum bicolor]
          Length = 219

 Score =  254 bits (650), Expect = 1e-65
 Identities = 119/172 (69%), Positives = 141/172 (81%), Gaps = 11/172 (6%)
 Frame = +3

Query: 204 EDIIFTEEPAAAPKT-----------AVFPSLLQPRVVVYDGVCHLCHAGVKWVINADKH 350
           +D++  E+P  A  T           A  P++LQPRV++YDGVCHLCH GVKWVI ADKH
Sbjct: 39  DDLVIDEDPPRAASTSAAAAATTTVAATVPTVLQPRVLIYDGVCHLCHRGVKWVIRADKH 98

Query: 351 NKIKFCCLQSRAAEPYLRACGVDREDVLRRFVFVEGPDLYHEASTAALKVASYLPLPYSA 530
            KI+FCC+QS+AAEPYLR  G+DREDVLRR +FVEGP+ Y+E STAALKVASYLPLPYS 
Sbjct: 99  AKIRFCCVQSKAAEPYLRLVGMDREDVLRRVLFVEGPEAYYEGSTAALKVASYLPLPYSV 158

Query: 531 LSTLLIVPTPLRDAVYDYVAKNRYKWFGKDDDCIVLREMELLERFIDREEMV 686
           LS+LLIVPTPLRDAVYDY+AKNRY WFGKDD+CIV ++ E+LERFIDREEM+
Sbjct: 159 LSSLLIVPTPLRDAVYDYIAKNRYDWFGKDDECIVTKDKEILERFIDREEML 210


>ref|NP_001146539.1| nucleic acid binding protein [Zea mays] gi|219887741|gb|ACL54245.1|
           unknown [Zea mays] gi|413952552|gb|AFW85201.1| nucleic
           acid binding protein [Zea mays]
          Length = 211

 Score =  254 bits (649), Expect = 2e-65
 Identities = 119/169 (70%), Positives = 140/169 (82%), Gaps = 8/169 (4%)
 Frame = +3

Query: 204 EDIIFTEEPAAAPKTAV--------FPSLLQPRVVVYDGVCHLCHAGVKWVINADKHNKI 359
           +D++  E+P  A  T+V         P+LLQPRV++YDGVCHLCH GVKWVI  DKH KI
Sbjct: 34  DDLVIDEDPPRAASTSVAATTVAATVPTLLQPRVLIYDGVCHLCHRGVKWVIRTDKHAKI 93

Query: 360 KFCCLQSRAAEPYLRACGVDREDVLRRFVFVEGPDLYHEASTAALKVASYLPLPYSALST 539
           KFCC+QS+AAEPYLR  G+DREDVLRR +FVEGP+ Y+E STAALKVASYLP PYS LS+
Sbjct: 94  KFCCVQSKAAEPYLRLVGMDREDVLRRVLFVEGPEAYYEGSTAALKVASYLPPPYSVLSS 153

Query: 540 LLIVPTPLRDAVYDYVAKNRYKWFGKDDDCIVLREMELLERFIDREEMV 686
           LLIVPTPLRDAVYDY+AKNRY WFGKDD+CIV ++ E+LERFIDREEM+
Sbjct: 154 LLIVPTPLRDAVYDYIAKNRYDWFGKDDECIVTKDKEILERFIDREEML 202


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