BLASTX nr result

ID: Cimicifuga21_contig00025729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025729
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93628.1| unknown [Populus trichocarpa]                           55   8e-06

>gb|ABK93628.1| unknown [Populus trichocarpa]
          Length = 116

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
 Frame = -1

Query: 461 ILFFCLITAFHLSSLNIXXXXXXXXXXXXXXXXXXXTGRRAMGKLDTEKPNLRQEEHNIK 282
           +L   L TAF+  S NI                     +R+M +       LR E  N K
Sbjct: 7   LLLAMLTTAFYFFSQNICSTSSPSMFFLTGRRSMRE--QRSMREQRMSSVTLRDEHENTK 64

Query: 281 VVETEWSQSDVKRLAXXXXXXXXXXXXXV--YHVDYHGVSTHPYPSPKHPRP 132
           V++ +  Q+ +K  +                YHVDYHGV+THP P+PKHP+P
Sbjct: 65  VLDEKTEQATIKEDSRQLAYPSSTDNLDDLVYHVDYHGVTTHPTPTPKHPKP 116


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