BLASTX nr result
ID: Cimicifuga21_contig00025701
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025701 (572 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299157.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 ref|XP_002512753.1| conserved hypothetical protein [Ricinus comm... 55 6e-06 ref|XP_002304738.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|XP_002299157.1| predicted protein [Populus trichocarpa] gi|222846415|gb|EEE83962.1| predicted protein [Populus trichocarpa] Length = 510 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Frame = +3 Query: 249 SVRKRNSVSEFDGLRAVSKRFKTIGSHENLLQEGIFQNP--GSSPLGLSLKKTPSFAKLI 422 SV+ S D L + KR K + ++ + + NP SP+GL+LKK+PSF LI Sbjct: 13 SVKLEADDSLEDQLSPLHKRSKLDPCLQVIIPDAVLYNPLQEPSPIGLTLKKSPSFLDLI 72 Query: 423 EAKLSQQRKTNPPTKHRNQFIDSEKARRKKEADKWKASNWNAKLLRIGFW 572 + KLSQQ +N K ADK KASN+ A LL+IG W Sbjct: 73 QMKLSQQNTSNTML---------SKKPSSAAADKLKASNFTASLLKIGSW 113 >ref|XP_002512753.1| conserved hypothetical protein [Ricinus communis] gi|223547764|gb|EEF49256.1| conserved hypothetical protein [Ricinus communis] Length = 517 Score = 55.5 bits (132), Expect = 6e-06 Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Frame = +3 Query: 219 STLEEEKPAISVRKRNSVSEFDGLRAVSKRFKTIGSHENL--LQEGIFQNP--GSSPLGL 386 ST +K + + +S S D L + KR K S +L + NP SPLGL Sbjct: 9 STRIIKKSPVKLELDDSSSLEDQLGPLHKRSKFDYSSSSLQMIPAASLSNPLEEPSPLGL 68 Query: 387 SLKKTPSFAKLIEAKLSQQRKTNPPTKHRNQFIDSEKARRKKEADKWKASNWNAKLLRIG 566 LKK+PSF LI+ KLSQ N P ++Q K DK KASN+ A LLRIG Sbjct: 69 RLKKSPSFLDLIQMKLSQ--AANNPNSKKDQ-----KTAVITATDKLKASNFPATLLRIG 121 Query: 567 FW 572 W Sbjct: 122 NW 123 >ref|XP_002304738.1| predicted protein [Populus trichocarpa] gi|222842170|gb|EEE79717.1| predicted protein [Populus trichocarpa] Length = 467 Score = 55.1 bits (131), Expect = 8e-06 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 3/116 (2%) Frame = +3 Query: 234 EKPAISVRKRNSVSEFDGLRAVSKRFKTIGSHENLLQ-EGIFQNP--GSSPLGLSLKKTP 404 EK A+ + S D L + KR K ++ +G+ NP SP+GL+LKK+P Sbjct: 10 EKTAVVKLEAAEDSLEDQLSPLFKRSKLDHPSSQVMNPDGVAFNPLGEPSPIGLTLKKSP 69 Query: 405 SFAKLIEAKLSQQRKTNPPTKHRNQFIDSEKARRKKEADKWKASNWNAKLLRIGFW 572 SF LI+ KLSQQ +N K ADK KASN+ A L+IG W Sbjct: 70 SFLDLIQMKLSQQNTSNTML---------SKKPGSVAADKLKASNFPASFLKIGNW 116