BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025663
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protei...    47   5e-11
ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-l...    54   7e-11
emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]       52   3e-10
ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-l...    52   9e-10
gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]     52   9e-10

>gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 567

 Score = 46.6 bits (109), Expect(2) = 5e-11
 Identities = 23/71 (32%), Positives = 39/71 (54%)
 Frame = -2

Query: 485 KYQAESEELSITNVYLIDLGKDVTESSLRTEFLHFGKVIGVALINDKKGKPMRLGFICRV 306
           K + +++EL  TNVY+ +L +DV E  LR   + +GK+  + +++D+K K    GF    
Sbjct: 175 KERGQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFE 234

Query: 305 TGGCQQGCCRA 273
           T    + C  A
Sbjct: 235 TPDEAKNCVEA 245



 Score = 45.4 bits (106), Expect(2) = 5e-11
 Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = -3

Query: 196 LKNLDESVDEVQLWEIISKCGGHANSANVIREVDG-ASKGSGFVYFSRPDEATRAIAVLN 20
           +KN+D+S+D  +L    +  G    SA V+R+    +SKG GFV ++ PDEA++A+A ++
Sbjct: 286 IKNIDDSIDSDKLRSTFAAYGT-ITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMH 344

Query: 19  GMML 8
           G M+
Sbjct: 345 GRMV 348


>ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
          Length = 629

 Score = 54.3 bits (129), Expect(2) = 7e-11
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = -3

Query: 310 ESLEDANKAVAELDGMXXXXXXXXXXKIFR------DFKESF---------------VCL 194
           E  EDANKAV E++G           +  +      + K  F               + +
Sbjct: 239 EKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYI 298

Query: 193 KNLDESVDEVQLWEIISKCGGHANSANVIREVDGASKGSGFVYFSRPDEATRAIAVLNGM 14
           KNLD+++D+ +L +  S  G    SA V+ E DG SKG GFV FS P+EAT+A+  +NG 
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGS-ITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGR 356

Query: 13  ML 8
           ++
Sbjct: 357 IV 358



 Score = 37.4 bits (85), Expect(2) = 7e-11
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 452 TNVYLIDLGKDVTESSLRTEFLHFGKVIGVALINDKKGKPMRLGFI 315
           TNVY+ + G ++ +  L+  F  +GK + V ++ D  GK    GF+
Sbjct: 191 TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFV 236


>emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 623

 Score = 51.6 bits (122), Expect(2) = 3e-10
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = -3

Query: 310 ESLEDANKAVAELDGMXXXXXXXXXXKIFR------DFKESF---------------VCL 194
           E  EDANKAV +++G           +  +      + K  F               + +
Sbjct: 239 EKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYI 298

Query: 193 KNLDESVDEVQLWEIISKCGGHANSANVIREVDGASKGSGFVYFSRPDEATRAIAVLNGM 14
           KNLD+++D+ +L +  S  G    SA V+ E +G SKG GFV FS P+EAT+A+  +NG 
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGS-ITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGR 356

Query: 13  ML 8
           ++
Sbjct: 357 IV 358



 Score = 37.7 bits (86), Expect(2) = 3e-10
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -2

Query: 452 TNVYLIDLGKDVTESSLRTEFLHFGKVIGVALINDKKGKPMRLGFI 315
           TNVY+ + G D+ +  L+  F  +GK + V ++ D  GK    GFI
Sbjct: 191 TNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFI 236


>ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
          Length = 653

 Score = 51.6 bits (122), Expect(2) = 9e-10
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = -3

Query: 310 ESLEDANKAVAELDGMXXXXXXXXXXKIFR------DFKESF---------------VCL 194
           E  EDANKAV +++G           +  +      + K  F               + +
Sbjct: 239 EKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYI 298

Query: 193 KNLDESVDEVQLWEIISKCGGHANSANVIREVDGASKGSGFVYFSRPDEATRAIAVLNGM 14
           KNLD+++D+ +L +  S  G    SA V+ E +G SKG GFV FS P+EAT+A+  +NG 
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGS-ITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGR 356

Query: 13  ML 8
           ++
Sbjct: 357 IV 358



 Score = 36.2 bits (82), Expect(2) = 9e-10
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 452 TNVYLIDLGKDVTESSLRTEFLHFGKVIGVALINDKKGKPMRLGFI 315
           TNVY+ + G D+ +  L+  F  +GK + V ++ D  GK    GF+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFV 236


>gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
          Length = 623

 Score = 51.6 bits (122), Expect(2) = 9e-10
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
 Frame = -3

Query: 310 ESLEDANKAVAELDGMXXXXXXXXXXKIFR------DFKESF---------------VCL 194
           E  EDANKAV +++G           +  +      + K  F               + +
Sbjct: 239 EKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYI 298

Query: 193 KNLDESVDEVQLWEIISKCGGHANSANVIREVDGASKGSGFVYFSRPDEATRAIAVLNGM 14
           KNLD+++D+ +L +  S  G    SA V+ E +G SKG GFV FS P+EAT+A+  +NG 
Sbjct: 299 KNLDDTIDDEKLRKEFSPFGS-ITSAKVMLE-EGRSKGFGFVCFSSPEEATKAVTEMNGR 356

Query: 13  ML 8
           ++
Sbjct: 357 IV 358



 Score = 36.2 bits (82), Expect(2) = 9e-10
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 452 TNVYLIDLGKDVTESSLRTEFLHFGKVIGVALINDKKGKPMRLGFI 315
           TNVY+ + G D+ +  L+  F  +GK + V ++ D  GK    GF+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFV 236