BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025648
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    69   4e-10
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    68   7e-10
ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana] ...    61   1e-07
dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]         61   1e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    61   1e-07

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
 Frame = +2

Query: 11  GCTGNWXXXXXXXXXXXXXXPFTRIQFHFPSQSTLPN-------QLNXXXXXXXXXXXKY 169
           G +  W              P TR + H P  ST PN        +             Y
Sbjct: 91  GSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVY 150

Query: 170 TQ--EELRDNFISKAILXXXXXXXXXVVAIVIFGAKRQLAISRPGDNSWIPIQTEIPIVA 343
           T+  +++RD+FI K IL          +A+VI      LA+ R  D+SW    T +    
Sbjct: 151 TRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSW----TFLEDAQ 206

Query: 344 AAVDDVIFFKNQFYCINRRGNVSVCDIDCNPPRAT 448
           +  +DVIF +  FY +N+ G+++VCD+  + PR +
Sbjct: 207 SYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVS 241


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
 Frame = +2

Query: 11  GCTGNWXXXXXXXXXXXXXXPFTRIQFHFPSQSTLPN-------QLNXXXXXXXXXXXKY 169
           G +  W              P TR + H P  ST PN        +             Y
Sbjct: 91  GSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVY 150

Query: 170 TQ--EELRDNFISKAILXXXXXXXXXVVAIVIFGAKRQLAISRPGDNSWIPIQTEIPIVA 343
           T+  +++RD+FI K IL          +A+VI      LA+ R  D+SW    T +    
Sbjct: 151 TRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSW----TFLEDAQ 206

Query: 344 AAVDDVIFFKNQFYCINRRGNVSVCDIDCNPPRAT 448
           +  +DVIF +  FY +N+ G+++VCD+  + PR +
Sbjct: 207 SYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVS 241


>ref|NP_200326.2| uncharacterized protein [Arabidopsis thaliana]
           gi|142991284|sp|Q9FLP7.2|FB294_ARATH RecName:
           Full=Putative F-box protein At5g55150
           gi|332009209|gb|AED96592.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 360

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = +2

Query: 179 ELRDNFISKAILXXXXXXXXXVVAIVIFGAKRQLAISRPGDNSWIPIQTEIPIVAAAVDD 358
           E   NFI KA+          VV +VI+   R+LA  R GD  W    T++  VA++VDD
Sbjct: 134 EALKNFIKKAVSSTSLLDDEWVV-LVIYNTDRKLAFCRRGDKQW----TDLESVASSVDD 188

Query: 359 VIFFKNQFYCINRRGNVSVCDIDCNPPRAT 448
           ++F    F+ I+R G +  C++  N P+AT
Sbjct: 189 IVFCNGVFFAIDRLGEIYHCELSANNPKAT 218


>dbj|BAB08584.1| unnamed protein product [Arabidopsis thaliana]
          Length = 340

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = +2

Query: 179 ELRDNFISKAILXXXXXXXXXVVAIVIFGAKRQLAISRPGDNSWIPIQTEIPIVAAAVDD 358
           E   NFI KA+          VV +VI+   R+LA  R GD  W    T++  VA++VDD
Sbjct: 114 EALKNFIKKAVSSTSLLDDEWVV-LVIYNTDRKLAFCRRGDKQW----TDLESVASSVDD 168

Query: 359 VIFFKNQFYCINRRGNVSVCDIDCNPPRAT 448
           ++F    F+ I+R G +  C++  N P+AT
Sbjct: 169 IVFCNGVFFAIDRLGEIYHCELSANNPKAT 198


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/171 (24%), Positives = 63/171 (36%), Gaps = 15/171 (8%)
 Frame = +2

Query: 2   RCIGCTGNWXXXXXXXXXXXXXXPFTRIQFHFPSQSTLPNQLNXXXXXXXXXXX------ 163
           R  G +  W              P TR +   P  S+ PN ++                 
Sbjct: 91  RHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLG 150

Query: 164 ---KYTQEELRDNFISKAILXXXXXXXXXVVAIVIFGAKRQLAISRPGDNSWIPIQTEIP 334
                +  ++RD+FI K +L          V I I      LA  R GD SW  ++    
Sbjct: 151 ERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVEN--- 207

Query: 335 IVAAAVDDVIFFKNQFYCINRRGNVSVCDIDCNPPRAT------QVSGDFK 469
              +  +DVIF    FY +N+ G + +CDI  + PR +      Q  GD +
Sbjct: 208 -ARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQ 257