BLASTX nr result

ID: Cimicifuga21_contig00025630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025630
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...    81   8e-14
emb|CBI39785.3| unnamed protein product [Vitis vinifera]               81   8e-14
emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]    81   8e-14
ref|XP_002522801.1| ring finger protein, putative [Ricinus commu...    77   1e-12
ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata ...    75   4e-12

>ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
          Length = 312

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = -3

Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47
           ++W++GYD GC+LSL LLYWRY+  +  Q + F       Q +   N+ESRSS LMNK R
Sbjct: 90  RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 146

Query: 46  TYLELFFAMWFVMG 5
           T LELFFA+WFVMG
Sbjct: 147 TSLELFFAIWFVMG 160


>emb|CBI39785.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = -3

Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47
           ++W++GYD GC+LSL LLYWRY+  +  Q + F       Q +   N+ESRSS LMNK R
Sbjct: 121 RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 177

Query: 46  TYLELFFAMWFVMG 5
           T LELFFA+WFVMG
Sbjct: 178 TSLELFFAIWFVMG 191


>emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
          Length = 343

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = -3

Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47
           ++W++GYD GC+LSL LLYWRY+  +  Q + F       Q +   N+ESRSS LMNK R
Sbjct: 121 RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 177

Query: 46  TYLELFFAMWFVMG 5
           T LELFFA+WFVMG
Sbjct: 178 TSLELFFAIWFVMG 191


>ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
           gi|223538039|gb|EEF39652.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = -3

Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47
           ++W++GYD+GCLLSL L+Y RYR  HV Q + F       Q     +++SR + LMNK R
Sbjct: 101 RIWIVGYDIGCLLSLLLVYGRYRQVHVVQGDSFGLSDLEQQRG---SEDSRCTHLMNKCR 157

Query: 46  TYLELFFAMWFVMG 5
           T LELFFA+WFVMG
Sbjct: 158 TSLELFFAIWFVMG 171


>ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313393|gb|EFH43816.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = -3

Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47
           +LW+ GY++GCLL+L LLY RYR  H +Q N F +    LQ   +  + +R S LMN+ R
Sbjct: 119 RLWITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGDIELQ-QRSREETTRCSHLMNRCR 177

Query: 46  TYLELFFAMWFVMG 5
           T LELFFA+WFV+G
Sbjct: 178 TSLELFFAIWFVIG 191


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