BLASTX nr result
ID: Cimicifuga21_contig00025630
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025630 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 81 8e-14 emb|CBI39785.3| unnamed protein product [Vitis vinifera] 81 8e-14 emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] 81 8e-14 ref|XP_002522801.1| ring finger protein, putative [Ricinus commu... 77 1e-12 ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata ... 75 4e-12 >ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera] Length = 312 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/74 (55%), Positives = 52/74 (70%) Frame = -3 Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47 ++W++GYD GC+LSL LLYWRY+ + Q + F Q + N+ESRSS LMNK R Sbjct: 90 RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 146 Query: 46 TYLELFFAMWFVMG 5 T LELFFA+WFVMG Sbjct: 147 TSLELFFAIWFVMG 160 >emb|CBI39785.3| unnamed protein product [Vitis vinifera] Length = 343 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/74 (55%), Positives = 52/74 (70%) Frame = -3 Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47 ++W++GYD GC+LSL LLYWRY+ + Q + F Q + N+ESRSS LMNK R Sbjct: 121 RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 177 Query: 46 TYLELFFAMWFVMG 5 T LELFFA+WFVMG Sbjct: 178 TSLELFFAIWFVMG 191 >emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] Length = 343 Score = 81.3 bits (199), Expect = 8e-14 Identities = 41/74 (55%), Positives = 52/74 (70%) Frame = -3 Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47 ++W++GYD GC+LSL LLYWRY+ + Q + F Q + N+ESRSS LMNK R Sbjct: 121 RIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRN---NEESRSSHLMNKCR 177 Query: 46 TYLELFFAMWFVMG 5 T LELFFA+WFVMG Sbjct: 178 TSLELFFAIWFVMG 191 >ref|XP_002522801.1| ring finger protein, putative [Ricinus communis] gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis] Length = 323 Score = 77.4 bits (189), Expect = 1e-12 Identities = 39/74 (52%), Positives = 51/74 (68%) Frame = -3 Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47 ++W++GYD+GCLLSL L+Y RYR HV Q + F Q +++SR + LMNK R Sbjct: 101 RIWIVGYDIGCLLSLLLVYGRYRQVHVVQGDSFGLSDLEQQRG---SEDSRCTHLMNKCR 157 Query: 46 TYLELFFAMWFVMG 5 T LELFFA+WFVMG Sbjct: 158 TSLELFFAIWFVMG 171 >ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata] gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata] Length = 335 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/74 (51%), Positives = 51/74 (68%) Frame = -3 Query: 226 KLWMLGYDLGCLLSLPLLYWRYRCAHVTQQNVFFYLPRRLQYDIAINQESRSSQLMNKWR 47 +LW+ GY++GCLL+L LLY RYR H +Q N F + LQ + + +R S LMN+ R Sbjct: 119 RLWITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGDIELQ-QRSREETTRCSHLMNRCR 177 Query: 46 TYLELFFAMWFVMG 5 T LELFFA+WFV+G Sbjct: 178 TSLELFFAIWFVIG 191