BLASTX nr result

ID: Cimicifuga21_contig00025626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025626
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   723   0.0  
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...   720   0.0  
ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4...   682   0.0  
emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]   681   0.0  
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...   679   0.0  

>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis vinifera]
            gi|297743902|emb|CBI36872.3| unnamed protein product
            [Vitis vinifera]
          Length = 743

 Score =  723 bits (1867), Expect = 0.0
 Identities = 373/461 (80%), Positives = 399/461 (86%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1622 ESILFAGKAIRVLRNPSPAFRCQDVVSHQQISRESHKVQGFTGRFGLPKEPSVDKKMVRE 1443
            ESILFAGKAIRVLRNPS AFR QD ++HQQI + SH+VQG TGRF   KEP +D +++ E
Sbjct: 286  ESILFAGKAIRVLRNPSSAFRFQDTLNHQQIPKGSHRVQGLTGRFSFQKEPFMDMQLIGE 345

Query: 1442 ELLPQSEADNIDAMLLELKEASEFRKRSFENVVDSIRAIAASHLWQLVVVRADLNGHLRA 1263
            ELLPQSEAD I+AML ELKE+SEF KRSFE  VDSIRAIAASHLWQLVVVRADLNGHL+A
Sbjct: 346  ELLPQSEADKIEAMLQELKESSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKA 405

Query: 1262 LKDYFLLAKGDFFQCFLEESRQLMRLPPRHSTAEADLMVPFQLAAIKTIGDEDKYFSRVS 1083
            LKDYFLLAKGDFFQCFLEESRQ+MRLPPR STAEADLMVPFQLAAIKTIGDEDKY+SRVS
Sbjct: 406  LKDYFLLAKGDFFQCFLEESRQMMRLPPRQSTAEADLMVPFQLAAIKTIGDEDKYYSRVS 465

Query: 1082 LRMPSFGITVASSQTNLSKVRASADGNSGFNQQGNVFSELSIEGWDGIALEYSVDWPLQL 903
            LRMPSFGITV SSQ +L K +  ADG  G        SE+S+EGWDGIALEYSVDWPLQL
Sbjct: 466  LRMPSFGITVKSSQADLPKEKTYADGILGS-------SEMSLEGWDGIALEYSVDWPLQL 518

Query: 902  FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFANHRHDRMNCSVSQQRRQ 723
            FFTQEVLSKY RVFQYLLRLKRTQMELEKSWASVMHQDHTDFA HR+D +NC+VSQQRRQ
Sbjct: 519  FFTQEVLSKYRRVFQYLLRLKRTQMELEKSWASVMHQDHTDFAQHRNDHINCTVSQQRRQ 578

Query: 722  GIRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQVHVQDSHDFTELVGFHQEYLSALI 543
              RPMWR+REHMAFLIRNLQFYIQVDVIESQWNVLQ H+Q+SHDFTELVGFHQEYLSALI
Sbjct: 579  RSRPMWRIREHMAFLIRNLQFYIQVDVIESQWNVLQAHIQESHDFTELVGFHQEYLSALI 638

Query: 542  SQSFLDIGSVSRILDSIMKLCQQFCWNIECE--NVNTSALEHITEEFNKKSNSLYTILRS 369
            SQSFLDIGSVSRILDSIMKLC QFCWNIE +  + NTS LE ITEEFNKKSNSLYTILRS
Sbjct: 639  SQSFLDIGSVSRILDSIMKLCLQFCWNIENQESSSNTSELERITEEFNKKSNSLYTILRS 698

Query: 368  SRLAGSQRAPXXXXXXXXXXXXXXFETTARGVLNVVRSRPT 246
            SRLAGSQRAP              FE TARGVLNVVRSRP+
Sbjct: 699  SRLAGSQRAPFLRRFLLRLNFNSYFEATARGVLNVVRSRPS 739


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223537656|gb|EEF39279.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 756

 Score =  720 bits (1859), Expect = 0.0
 Identities = 369/465 (79%), Positives = 400/465 (86%), Gaps = 2/465 (0%)
 Frame = -2

Query: 1622 ESILFAGKAIRVLRNPSPAFRCQDVVSHQQISRESHKVQGFTGRFGLPKEPSVDKKMVRE 1443
            ES+LFAGKAIRVLRNPSPAF+C+D + +QQ+ +    +QGF GRF + KEP VD  ++ E
Sbjct: 287  ESVLFAGKAIRVLRNPSPAFQCKDSLHNQQVPKGGQNIQGFVGRFPVQKEPFVDSNLIGE 346

Query: 1442 ELLPQSEADNIDAMLLELKEASEFRKRSFENVVDSIRAIAASHLWQLVVVRADLNGHLRA 1263
            ELLPQSEAD I+A+L  LKE+SEF KRSFE+ VDSIRAIAASHLWQLVVVRADLNGHL+A
Sbjct: 347  ELLPQSEADKIEALLQGLKESSEFHKRSFESAVDSIRAIAASHLWQLVVVRADLNGHLKA 406

Query: 1262 LKDYFLLAKGDFFQCFLEESRQLMRLPPRHSTAEADLMVPFQLAAIKTIGDEDKYFSRVS 1083
            LKDYFLLAKGDFFQCFLEESRQLMRLPPR STAEADLMVPFQLAAIKTIG+EDKYFSRVS
Sbjct: 407  LKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLAAIKTIGEEDKYFSRVS 466

Query: 1082 LRMPSFGITVASSQTNLSKVRASADGNSGFNQQGNVFSELSIEGWDGIALEYSVDWPLQL 903
            LRMPSFGITV SSQ +L K +A +D NSG     N  SE+ I+GWDGIALEY+VDWPLQL
Sbjct: 467  LRMPSFGITVKSSQVDLPKSKAHSDSNSG-AALSNAASEMFIDGWDGIALEYAVDWPLQL 525

Query: 902  FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFANHRHDRMNCSVSQQRRQ 723
            FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFA   +DR NCS+SQQRRQ
Sbjct: 526  FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFAKRHNDR-NCSISQQRRQ 584

Query: 722  GIRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQVHVQDSHDFTELVGFHQEYLSALI 543
              RPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQ H+QDSHDFTELVGFHQEYLSAL+
Sbjct: 585  RFRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQAHIQDSHDFTELVGFHQEYLSALV 644

Query: 542  SQSFLDIGSVSRILDSIMKLCQQFCWNIECE--NVNTSALEHITEEFNKKSNSLYTILRS 369
            SQSFLDIGSVSRILDSIM+LC QFCW+IE +  N NTS L+HITEEFNKKSNSLYTILRS
Sbjct: 645  SQSFLDIGSVSRILDSIMRLCLQFCWSIENQESNPNTSELDHITEEFNKKSNSLYTILRS 704

Query: 368  SRLAGSQRAPXXXXXXXXXXXXXXFETTARGVLNVVRSRPTLPDL 234
            SRLAGSQRAP              FE TARGVLNVVR  PTLP L
Sbjct: 705  SRLAGSQRAPFLRRFLLRLNYNAFFEATARGVLNVVRPSPTLPSL 749


>ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 733

 Score =  682 bits (1760), Expect = 0.0
 Identities = 350/466 (75%), Positives = 391/466 (83%), Gaps = 2/466 (0%)
 Frame = -2

Query: 1622 ESILFAGKAIRVLRNPSPAFRCQDVVSHQQISRESHKVQGFTGRFGLPKEPSVDKKMVRE 1443
            ESILFAGKA++VLRNPSP+F+  D V H Q+ +   K+ G  GRF   +EP++   M  E
Sbjct: 271  ESILFAGKAVQVLRNPSPSFQSGDAV-HPQMPKSFQKIHGLAGRFHFQREPAIHTGM-GE 328

Query: 1442 ELLPQSEADNIDAMLLELKEASEFRKRSFENVVDSIRAIAASHLWQLVVVRADLNGHLRA 1263
            +LLPQSEAD I+AMLL LKE+SEF KRSFE  VDS++A+AASHLWQLVVVRADLNGHL+A
Sbjct: 329  DLLPQSEADKIEAMLLNLKESSEFHKRSFECAVDSVQAVAASHLWQLVVVRADLNGHLKA 388

Query: 1262 LKDYFLLAKGDFFQCFLEESRQLMRLPPRHSTAEADLMVPFQLAAIKTIGDEDKYFSRVS 1083
            LKDYFLLAKGDFFQCFLEESRQLMRLPPR STAEADLMVPFQLAA+KTIG+EDKYFS+VS
Sbjct: 389  LKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLAALKTIGEEDKYFSKVS 448

Query: 1082 LRMPSFGITVASSQTNLSKVRASADGNSGFNQQGNVFSELSIEGWDGIALEYSVDWPLQL 903
            LRMPSFGITV  S  +L K  +S DG+SG +   N  SE+S++GWDGIALEYSVDWPL L
Sbjct: 449  LRMPSFGITVKPSLLDLPKPTSSVDGSSGASLS-NALSEMSVDGWDGIALEYSVDWPLHL 507

Query: 902  FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFANHRHDRMNCSVSQQRRQ 723
            FFTQEVLSKYLR+FQYLLRLKRTQMELEK WASVMHQ H+DF  HR+D+  CS +QQ+RQ
Sbjct: 508  FFTQEVLSKYLRIFQYLLRLKRTQMELEKLWASVMHQYHSDFPKHRNDQEKCSEAQQKRQ 567

Query: 722  GIRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQVHVQDSHDFTELVGFHQEYLSALI 543
              RPMWRVREHMAFL+RNLQFYIQVDVIESQWN+LQ H+Q+SHDFTELVGFHQEYLSALI
Sbjct: 568  RFRPMWRVREHMAFLVRNLQFYIQVDVIESQWNILQSHIQESHDFTELVGFHQEYLSALI 627

Query: 542  SQSFLDIGSVSRILDSIMKLCQQFCWNIECEN--VNTSALEHITEEFNKKSNSLYTILRS 369
            SQ+FLDIGSVSRILDSIMKLC QFCWNIE ++   NTS LEHI EEFNKKSNSLYTILRS
Sbjct: 628  SQTFLDIGSVSRILDSIMKLCLQFCWNIENQDNCSNTSELEHIAEEFNKKSNSLYTILRS 687

Query: 368  SRLAGSQRAPXXXXXXXXXXXXXXFETTARGVLNVVRSRPTLPDLH 231
            SRLAGSQRAP              FE TARGVLNVVR RPTLP L+
Sbjct: 688  SRLAGSQRAPFLRRFLLRLNLNSFFEATARGVLNVVRPRPTLPVLN 733


>emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]
          Length = 1529

 Score =  681 bits (1757), Expect = 0.0
 Identities = 353/447 (78%), Positives = 378/447 (84%), Gaps = 2/447 (0%)
 Frame = -2

Query: 1580 NPSPAFRCQDVVSHQQISRESHKVQGFTGRFGLPKEPSVDKKMVREELLPQSEADNIDAM 1401
            NPS AFR QD ++HQQI + SH+VQG TGRF   KEP +D +++ EELLPQSEAD I   
Sbjct: 1094 NPSSAFRFQDTLNHQQIPKGSHRVQGLTGRFSFQKEPFMDMQLIGEELLPQSEADKI--- 1150

Query: 1400 LLELKEASEFRKRSFENVVDSIRAIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQ 1221
                 E+SEF KRSFE  VDSIRAIAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQ
Sbjct: 1151 -----ESSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQ 1205

Query: 1220 CFLEESRQLMRLPPRHSTAEADLMVPFQLAAIKTIGDEDKYFSRVSLRMPSFGITVASSQ 1041
            CFLEESRQ+MRLPPR STAEADLMVPFQLAAIKTIGDEDKY+SRVSLRMPSFGITV SSQ
Sbjct: 1206 CFLEESRQMMRLPPRQSTAEADLMVPFQLAAIKTIGDEDKYYSRVSLRMPSFGITVKSSQ 1265

Query: 1040 TNLSKVRASADGNSGFNQQGNVFSELSIEGWDGIALEYSVDWPLQLFFTQEVLSKYLRVF 861
             +L K +  ADG  G        SE+S+EGWDGIALEYSVDWPLQLFFTQEVLSKY RVF
Sbjct: 1266 ADLPKEKTYADGILGS-------SEMSLEGWDGIALEYSVDWPLQLFFTQEVLSKYRRVF 1318

Query: 860  QYLLRLKRTQMELEKSWASVMHQDHTDFANHRHDRMNCSVSQQRRQGIRPMWRVREHMAF 681
            QYLLRLKRTQMELEKSWASVMHQDHTDFA HR+D +NC+VSQQRRQ  RPMWR+REHMAF
Sbjct: 1319 QYLLRLKRTQMELEKSWASVMHQDHTDFAQHRNDHINCTVSQQRRQRSRPMWRIREHMAF 1378

Query: 680  LIRNLQFYIQVDVIESQWNVLQVHVQDSHDFTELVGFHQEYLSALISQSFLDIGSVSRIL 501
            LIRNLQFYIQVDVIESQWNVLQ H+Q+SHDFTELVGFHQEYLSALISQSFLDIGSVSRIL
Sbjct: 1379 LIRNLQFYIQVDVIESQWNVLQAHIQESHDFTELVGFHQEYLSALISQSFLDIGSVSRIL 1438

Query: 500  DSIMKLCQQFCWNIECE--NVNTSALEHITEEFNKKSNSLYTILRSSRLAGSQRAPXXXX 327
            DSIMKLC QFCWNIE +  + NTS LE ITEEFNKKSNSLYTILRSSRLAGSQRAP    
Sbjct: 1439 DSIMKLCLQFCWNIENQESSSNTSELERITEEFNKKSNSLYTILRSSRLAGSQRAPFLRR 1498

Query: 326  XXXXXXXXXXFETTARGVLNVVRSRPT 246
                      FE TARGVLNVVRSRP+
Sbjct: 1499 FLLRLNFNSYFEATARGVLNVVRSRPS 1525


>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222861112|gb|EEE98654.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 728

 Score =  679 bits (1751), Expect = 0.0
 Identities = 356/463 (76%), Positives = 386/463 (83%), Gaps = 2/463 (0%)
 Frame = -2

Query: 1622 ESILFAGKAIRVLRNPSPAFRCQDVVSHQQISRESHKVQGFTGRFGLPKEPSVDKKMVRE 1443
            ESILFAGKAIRVLRNPSPAF+ +D V +QQI + + K Q  TGRF   KE   D  ++ E
Sbjct: 277  ESILFAGKAIRVLRNPSPAFQFKDPVYNQQIPKGAQKNQVSTGRFPFQKESFEDTNLIGE 336

Query: 1442 ELLPQSEADNIDAMLLELKEASEFRKRSFENVVDSIRAIAASHLWQLVVVRADLNGHLRA 1263
            ELLPQSEAD I+ ML +LKE+SEF KRSFE  VDSIRAIAASHLWQLVVVRADLNGHL+A
Sbjct: 337  ELLPQSEADKIENMLRDLKESSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKA 396

Query: 1262 LKDYFLLAKGDFFQCFLEESRQLMRLPPRHSTAEADLMVPFQLAAIKTIGDEDKYFSRVS 1083
            LKDYFLLAKGDFFQCFLEESRQ+MRLPPR STAEADLMVPFQLAAIKTIG+E+KYFSRVS
Sbjct: 397  LKDYFLLAKGDFFQCFLEESRQMMRLPPRQSTAEADLMVPFQLAAIKTIGEEEKYFSRVS 456

Query: 1082 LRMPSFGITVASSQTNLSKVRASADGNSGFNQQGNVFSELSIEGWDGIALEYSVDWPLQL 903
            LRMPSFG  V SSQ +L K  +++   S      N  SE+S++GWDGIALEYSVDWPLQL
Sbjct: 457  LRMPSFGSAVKSSQVDLPKTGSTSASLS------NASSEISLDGWDGIALEYSVDWPLQL 510

Query: 902  FFTQEVLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFANHRHDRMNCSVSQQRRQ 723
            FFTQEV      VFQYLLRLKRTQMELEKSWASVMHQDHTDFA  R+DR+NCSVSQQRRQ
Sbjct: 511  FFTQEV------VFQYLLRLKRTQMELEKSWASVMHQDHTDFAKRRNDRLNCSVSQQRRQ 564

Query: 722  GIRPMWRVREHMAFLIRNLQFYIQVDVIESQWNVLQVHVQDSHDFTELVGFHQEYLSALI 543
              RPMW VREHMAFLIRNLQFYIQVDVIESQWNVLQ H++DSHDFTELVGFHQEYLSALI
Sbjct: 565  RFRPMWHVREHMAFLIRNLQFYIQVDVIESQWNVLQAHIRDSHDFTELVGFHQEYLSALI 624

Query: 542  SQSFLDIGSVSRILDSIMKLCQQFCWNIECE--NVNTSALEHITEEFNKKSNSLYTILRS 369
            SQSFLDIGSVSRILDSIMKLC QFCW+IE +  N NTS LEH+TEEFNKKSNSLYTILRS
Sbjct: 625  SQSFLDIGSVSRILDSIMKLCLQFCWSIENQENNPNTSELEHLTEEFNKKSNSLYTILRS 684

Query: 368  SRLAGSQRAPXXXXXXXXXXXXXXFETTARGVLNVVRSRPTLP 240
            SRLAGSQRAP              FETTA+GVLN+VR  PTLP
Sbjct: 685  SRLAGSQRAPFLRRFLLRLNFNLFFETTAQGVLNIVRPSPTLP 727


Top