BLASTX nr result

ID: Cimicifuga21_contig00025623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025623
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38126.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002273027.1| PREDICTED: uncharacterized protein LOC100244...    96   3e-18
ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|2...    96   6e-18
ref|XP_002533796.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_002887395.1| hypothetical protein ARALYDRAFT_476312 [Arab...    93   3e-17

>emb|CBI38126.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 56/99 (56%), Positives = 61/99 (61%), Gaps = 12/99 (12%)
 Frame = -2

Query: 466 MSLACLVCHGVDXXXXXXXXXXXXXSDNEGRCSTIVTCLTRKASL------THEIKSSKV 305
           MSLACLVCH V+             SDNEGRCS I  CL R+ASL      +  I+SSKV
Sbjct: 120 MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCLARRASLPAPTANSSIIRSSKV 179

Query: 304 TPQPFGGNG------PRLVRSRAVRRDIVRDWNFDEIVM 206
           TP P   N       PRLVRS AVRRDIVRDWNFDE+VM
Sbjct: 180 TPHPSIPNSSGIPGTPRLVRSCAVRRDIVRDWNFDEVVM 218


>ref|XP_002273027.1| PREDICTED: uncharacterized protein LOC100244175 [Vitis vinifera]
          Length = 101

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 56/99 (56%), Positives = 61/99 (61%), Gaps = 12/99 (12%)
 Frame = -2

Query: 466 MSLACLVCHGVDXXXXXXXXXXXXXSDNEGRCSTIVTCLTRKASL------THEIKSSKV 305
           MSLACLVCH V+             SDNEGRCS I  CL R+ASL      +  I+SSKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCLARRASLPAPTANSSIIRSSKV 60

Query: 304 TPQPFGGNG------PRLVRSRAVRRDIVRDWNFDEIVM 206
           TP P   N       PRLVRS AVRRDIVRDWNFDE+VM
Sbjct: 61  TPHPSIPNSSGIPGTPRLVRSCAVRRDIVRDWNFDEVVM 99


>ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|222835697|gb|EEE74132.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 57/101 (56%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
 Frame = -2

Query: 466 MSLACLVCHGVDXXXXXXXXXXXXXSDNEGRCSTIVTCLTRKASL------THEIKSSKV 305
           MSLACLVCH V+             SDNEGRCS I  C+TRK SL      +    SSKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCITRKLSLPPPRANSSFASSSKV 60

Query: 304 TPQPFG-GNG-----PRLVRSRAVRRDIVRDWNFDEIVMGR 200
           TPQP   GN      PRLVRSRAVRRD+VRDWNFD  VM R
Sbjct: 61  TPQPSSPGNDDMTGPPRLVRSRAVRRDLVRDWNFDGFVMER 101


>ref|XP_002533796.1| conserved hypothetical protein [Ricinus communis]
           gi|223526269|gb|EEF28583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/101 (55%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
 Frame = -2

Query: 466 MSLACLVCHGVDXXXXXXXXXXXXXSDNEGRCSTIVTCLTRKASL------THEIKSSKV 305
           MSLACLVCH V+             SDNEGRCS I  CLTRK SL      +    +SKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIGKCLTRKLSLPPPRGNSSIASTSKV 60

Query: 304 TPQPFG-GNG-----PRLVRSRAVRRDIVRDWNFDEIVMGR 200
           TPQP   GN      PRLVRSRAVRRD+VRDWNF+ +VM R
Sbjct: 61  TPQPSNPGNDEITGPPRLVRSRAVRRDLVRDWNFERVVMER 101


>ref|XP_002887395.1| hypothetical protein ARALYDRAFT_476312 [Arabidopsis lyrata subsp.
           lyrata] gi|297333236|gb|EFH63654.1| hypothetical protein
           ARALYDRAFT_476312 [Arabidopsis lyrata subsp. lyrata]
          Length = 99

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 54/95 (56%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
 Frame = -2

Query: 466 MSLACLVCHGVDXXXXXXXXXXXXXSDNEGRCSTIVTCLTRKA------SLTHEIKSSKV 305
           MS ACLVCH V+             SDNEGRCS I +CLTRK+      S      SSKV
Sbjct: 1   MSFACLVCHSVESPSHSFRSYSVSSSDNEGRCSVIASCLTRKSLIQAARSNAFPASSSKV 60

Query: 304 TPQP----FGGNGPRLVRSRAVRRDIVRDWNFDEI 212
           TPQP      G  PRLVRSRAVRRDIVRDWNF+EI
Sbjct: 61  TPQPNFQVGEGASPRLVRSRAVRRDIVRDWNFNEI 95


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