BLASTX nr result

ID: Cimicifuga21_contig00025608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025608
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36056.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002328341.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002515962.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003627044.1| hypothetical protein MTR_8g014490 [Medicago ...    84   9e-15

>emb|CBI36056.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  129 bits (325), Expect = 2e-28
 Identities = 76/150 (50%), Positives = 97/150 (64%)
 Frame = +1

Query: 61  RKALKEITNGGRNSVXXXXXXXXXXXXXXXNEDNVLDRLLLVHSDLSNVIQQIDELVVQA 240
           RK  ++I+NGG +S                N+++ LDRLLLVHSDLS  I QIDELVVQA
Sbjct: 12  RKPFRDISNGGNSS-------KPLKKKVPQNDESALDRLLLVHSDLSTFIHQIDELVVQA 64

Query: 241 VKVEGTSKNGKKEIDLFANVLSDMHSSLKSWIPRFRNLLTNPKVESGNQLEQSSPCKTFP 420
           + ++ +S  G +EI+ F +VLS+M SSLK W PRF+  L+ P V+S NQL QSS  +T  
Sbjct: 65  LNLKTSSAEGWEEIESFTHVLSEMLSSLKPWAPRFQKALSLPSVKSENQLGQSSLSET-A 123

Query: 421 TANEGTRNVQDSPVQSDLDSFVSPSPLVSW 510
             NE   NV DSP  S ++S VSPSPLVSW
Sbjct: 124 GINECETNVVDSPHPSKVESLVSPSPLVSW 153


>ref|XP_002328341.1| predicted protein [Populus trichocarpa] gi|222838056|gb|EEE76421.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/122 (50%), Positives = 85/122 (69%)
 Frame = +1

Query: 151 NEDNVLDRLLLVHSDLSNVIQQIDELVVQAVKVEGTSKNGKKEIDLFANVLSDMHSSLKS 330
           ++D  LDRLLLV SDLS++  QIDELV QA K++ TSK G +EI+ F +VLS+M SSLK 
Sbjct: 61  DDDGFLDRLLLVQSDLSSLTSQIDELVAQAFKLKATSKEGSEEIESFMHVLSNMLSSLKP 120

Query: 331 WIPRFRNLLTNPKVESGNQLEQSSPCKTFPTANEGTRNVQDSPVQSDLDSFVSPSPLVSW 510
           W+PRF+ +L++  VE   +L+     +      +G+ +V DSP +S +DS +SPSPLVSW
Sbjct: 121 WVPRFQKVLSSHFVEPEKKLQHKIVSE---ITEDGSFDV-DSPDKSRMDSLISPSPLVSW 176

Query: 511 CA 516
            A
Sbjct: 177 RA 178


>ref|XP_002515962.1| conserved hypothetical protein [Ricinus communis]
           gi|223544867|gb|EEF46382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
 Frame = +1

Query: 154 EDNVLDRLLLVHSDLSNVIQQIDELVVQAVKVEGTSKNGKKEIDLFANVLSDMHSSLKSW 333
           E++ LD LLLV SDLS++ +QIDE+V QA +V+ TSK G++EI+ F++VLSDM SSLK W
Sbjct: 73  EEDCLDLLLLVQSDLSSLTRQIDEIVAQAFEVKTTSKQGRREIESFSHVLSDMISSLKPW 132

Query: 334 IPRFRNLLT-NPKVESGNQLEQSSPCKTFPTANEGTRNVQDSPVQSDLDSFVSPSPLVSW 510
           +PRF+  L+ +P  E G +   +   KT    N+  +   +SP Q+  +S +SPSPLVSW
Sbjct: 133 VPRFQKALSRSPSAEFGVKCLAN---KTVSAVNDDDKFEVESPKQTGRNSLISPSPLVSW 189

Query: 511 CA 516
            A
Sbjct: 190 RA 191


>ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|222858016|gb|EEE95563.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/102 (50%), Positives = 71/102 (69%)
 Frame = +1

Query: 211 QQIDELVVQAVKVEGTSKNGKKEIDLFANVLSDMHSSLKSWIPRFRNLLTNPKVESGNQL 390
           ++IDELV QA K++ TSK G++EI+ F +VLS+M SSLK W+PRF+ +L++  VE  NQL
Sbjct: 39  RRIDELVAQAFKLKATSKEGRQEIESFMHVLSNMLSSLKPWVPRFQKVLSSHFVEPENQL 98

Query: 391 EQSSPCKTFPTANEGTRNVQDSPVQSDLDSFVSPSPLVSWCA 516
               P KT    NE      DSP ++++DS +SPSPLVSW A
Sbjct: 99  ----PHKTVSEINEDGSFDVDSPEKTNMDSLISPSPLVSWRA 136


>ref|XP_003627044.1| hypothetical protein MTR_8g014490 [Medicago truncatula]
           gi|355521066|gb|AET01520.1| hypothetical protein
           MTR_8g014490 [Medicago truncatula]
          Length = 454

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
 Frame = +1

Query: 151 NEDNVLDRLLLVHSDLSNVIQQIDELVVQAVKVE-GTSKNGKKEIDLFANVLSDMHSSLK 327
           N+DN    L L+HSDLS ++ QIDELVV+A++V+   SK GK +++ F+N+LS+M S LK
Sbjct: 22  NDDN--SSLTLLHSDLSTLLHQIDELVVKALEVKKSVSKEGKSDVESFSNLLSEMLSRLK 79

Query: 328 SWIPRFRNLLTNPKVESGNQLEQSSPCKTFPTANEGTRNVQDSPVQSDLDSFVSPSPLVS 507
            W P+ ++ L++  VES  + E+ S        +E   +  +SP ++ L   VSPSPLVS
Sbjct: 80  PWGPKLQSSLSSTSVESEIKSEEVS-------CDESNVSDCESPKETTL---VSPSPLVS 129

Query: 508 WCA 516
           W A
Sbjct: 130 WRA 132


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