BLASTX nr result

ID: Cimicifuga21_contig00025598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025598
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...   192   5e-47
emb|CBI29966.3| unnamed protein product [Vitis vinifera]              192   5e-47
ref|XP_002531583.1| programmed cell death protein, putative [Ric...   171   1e-40
ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sat...   160   3e-37
ref|XP_004161672.1| PREDICTED: LOW QUALITY PROTEIN: protein RRP5...   158   1e-36

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score =  192 bits (489), Expect = 5e-47
 Identities = 101/154 (65%), Positives = 116/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 282 DSVRSEATPLQIEDDVPDFPRGGGSSLSRREKDEVLAGVDAEFXXXXXXXXXXXXXXXXS 461
           ++V SE+  LQ+EDDVPDFPRGGGS LSR+E D + A VDAEF                +
Sbjct: 35  EAVPSESLALQMEDDVPDFPRGGGSLLSRQEHDAIRAEVDAEFEAGERKTKKKNKNAKKT 94

Query: 462 ---YLEEDDLGSLFGEGITGKLPKFANKITLKNVSPGMKLWGVIAEVNEKDLVISLPGGL 632
              Y  EDD+GSLFG+GITGKLP+FANKITLKN+SPGMKLWGV+AEVNEKDL ISLPGGL
Sbjct: 95  KKNYALEDDMGSLFGDGITGKLPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGL 154

Query: 633 RGLVRASEASDLIAENEIKDSEHNFLSSIFHVGQ 734
           RGLVRASEA D +  NEIKD+E  FL  IFH+GQ
Sbjct: 155 RGLVRASEAFDPLFSNEIKDAEGIFLPRIFHIGQ 188


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score =  192 bits (489), Expect = 5e-47
 Identities = 101/154 (65%), Positives = 116/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 282 DSVRSEATPLQIEDDVPDFPRGGGSSLSRREKDEVLAGVDAEFXXXXXXXXXXXXXXXXS 461
           ++V SE+  LQ+EDDVPDFPRGGGS LSR+E D + A VDAEF                +
Sbjct: 35  EAVPSESLALQMEDDVPDFPRGGGSLLSRQEHDAIRAEVDAEFEAGERKTKKKNKNAKKT 94

Query: 462 ---YLEEDDLGSLFGEGITGKLPKFANKITLKNVSPGMKLWGVIAEVNEKDLVISLPGGL 632
              Y  EDD+GSLFG+GITGKLP+FANKITLKN+SPGMKLWGV+AEVNEKDL ISLPGGL
Sbjct: 95  KKNYALEDDMGSLFGDGITGKLPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGL 154

Query: 633 RGLVRASEASDLIAENEIKDSEHNFLSSIFHVGQ 734
           RGLVRASEA D +  NEIKD+E  FL  IFH+GQ
Sbjct: 155 RGLVRASEAFDPLFSNEIKDAEGIFLPRIFHIGQ 188


>ref|XP_002531583.1| programmed cell death protein, putative [Ricinus communis]
           gi|223528779|gb|EEF30786.1| programmed cell death
           protein, putative [Ricinus communis]
          Length = 607

 Score =  171 bits (434), Expect = 1e-40
 Identities = 92/157 (58%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
 Frame = +3

Query: 282 DSVRSEATPLQIEDDVPDFPRGGGSSLSRREKDEVLAGVDAEFXXXXXXXXXXXXXXXX- 458
           D+V  EA   Q+EDD P+FPRGG SSLSRRE++E+ A VDAEF                 
Sbjct: 40  DAVAPEAMAFQLEDDAPEFPRGGASSLSRREREEIRAEVDAEFESEERSLMMMKKKNKGK 99

Query: 459 -----SYLEEDDLGSLFGEGITGKLPKFANKITLKNVSPGMKLWGVIAEVNEKDLVISLP 623
                S+ E DDLGSLFG+G+TGKLP+FAN IT KN+SPGMK+WGV+AEVNEKDLVISLP
Sbjct: 100 KLQNKSHSEADDLGSLFGDGLTGKLPRFANNITFKNISPGMKVWGVVAEVNEKDLVISLP 159

Query: 624 GGLRGLVRASEASDLIAENEIKDSEHNFLSSIFHVGQ 734
           GGLRGL R+ +A D +  +EI+D E N L SIF  GQ
Sbjct: 160 GGLRGLARSVDALDPVFGDEIEDIEGN-LPSIFCTGQ 195


>ref|XP_004144698.1| PREDICTED: protein RRP5 homolog [Cucumis sativus]
          Length = 1898

 Score =  160 bits (405), Expect = 3e-37
 Identities = 88/180 (48%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
 Frame = +3

Query: 198 KPPHKPINRKPKDSLXXXXXXXXXXXXXDSVRSEATPLQIEDDVPDFPRGGGSSLSRREK 377
           K   KP N K K S              ++ + E   LQIEDDVPDFPRGGG  +S+ + 
Sbjct: 16  KHSKKPFNSKKKTS--------------ETAKPETVSLQIEDDVPDFPRGGGGYMSQNKG 61

Query: 378 DEVLAGVDAEFXXXXXXXXXXXXXXXXSYLEE-DDLGSLFGEGITGKLPKFANKITLKNV 554
           ++V A  D EF                 +    DDL SL   G+ G LPK+ANKITLKN+
Sbjct: 62  EKVRAEGDKEFQNDDLKMTTKRGKKRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNI 121

Query: 555 SPGMKLWGVIAEVNEKDLVISLPGGLRGLVRASEASDLIAENEIKDSEHNFLSSIFHVGQ 734
           +P MK WGV+AEVN+KDLVISLPGGLRGLV A+EA D I E E++D+EH+ L  +FHVGQ
Sbjct: 122 NPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAAEAFDPILEKEVEDTEHDLLPVMFHVGQ 181


>ref|XP_004161672.1| PREDICTED: LOW QUALITY PROTEIN: protein RRP5 homolog [Cucumis
           sativus]
          Length = 609

 Score =  158 bits (400), Expect = 1e-36
 Identities = 81/152 (53%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
 Frame = +3

Query: 282 DSVRSEATPLQIEDDVPDFPRGGGSSLSRREKDEVLAGVDAEFXXXXXXXXXXXXXXXXS 461
           ++ + E   LQIEDDVPDFPRGGG  +S+ + ++V A  D EF                 
Sbjct: 30  ETAKPETVSLQIEDDVPDFPRGGGGYMSQNKGEKVRAEGDKEFQNDDLKMTTKRGKKRRK 89

Query: 462 YLEE-DDLGSLFGEGITGKLPKFANKITLKNVSPGMKLWGVIAEVNEKDLVISLPGGLRG 638
           +    DDL SL   G+ G LPK+ANKITLKN++P MK WGV+AEVN+KDLVISLPGGLRG
Sbjct: 90  HPSNGDDLESLLNNGVVGNLPKYANKITLKNINPRMKFWGVVAEVNKKDLVISLPGGLRG 149

Query: 639 LVRASEASDLIAENEIKDSEHNFLSSIFHVGQ 734
           LV A+EA D I E E++D+EH+ L  +FHVGQ
Sbjct: 150 LVSAAEAFDPILEKEVEDTEHDLLPVMFHVGQ 181


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