BLASTX nr result

ID: Cimicifuga21_contig00025582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025582
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|XP_002527946.1| nuclease, putative [Ricinus communis] gi|223...   107   1e-21
ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s...   105   4e-21

>ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/97 (54%), Positives = 61/97 (62%)
 Frame = +2

Query: 2   LKQHNGDLKGGAKTSRAGRPWICACIIQGFKDHGEACRLEXXXXXXXXXXXXXXXXXXXX 181
           LKQHNG+LKGGAK SRAGRPWICACII+GF D  EAC+ E                    
Sbjct: 79  LKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFESKWKIFSRKLPRKRIDDDQM 138

Query: 182 XXXXXXSLALLQHRQAALNKIQGSFDFSQLEIDWKLN 292
                 S  LLQHR+ AL++++GSFD S LEIDWKLN
Sbjct: 139 KQSSKDSHRLLQHRKTALDRVKGSFDLSHLEIDWKLN 175


>ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/97 (54%), Positives = 61/97 (62%)
 Frame = +2

Query: 2   LKQHNGDLKGGAKTSRAGRPWICACIIQGFKDHGEACRLEXXXXXXXXXXXXXXXXXXXX 181
           LKQHNG+LKGGAK SRAGRPWICACII+GF D  EAC+ E                    
Sbjct: 80  LKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFESKWKSFSRKFPRKRIDDDQM 139

Query: 182 XXXXXXSLALLQHRQAALNKIQGSFDFSQLEIDWKLN 292
                 S  LLQHR+ AL++++GSFD S LEIDWKLN
Sbjct: 140 KQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWKLN 176


>ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/97 (54%), Positives = 60/97 (61%)
 Frame = +2

Query: 2   LKQHNGDLKGGAKTSRAGRPWICACIIQGFKDHGEACRLEXXXXXXXXXXXXXXXXXXXX 181
           LKQHNG LKGGAK SRAGRPWICACII+GF D  EAC+ E                    
Sbjct: 80  LKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSEACKFESKWKSFSRKFPRKRIDDDQM 139

Query: 182 XXXXXXSLALLQHRQAALNKIQGSFDFSQLEIDWKLN 292
                 S  LLQHR+ AL++++GSFD S LEIDWKLN
Sbjct: 140 KQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWKLN 176


>ref|XP_002527946.1| nuclease, putative [Ricinus communis] gi|223532650|gb|EEF34435.1|
           nuclease, putative [Ricinus communis]
          Length = 150

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/98 (53%), Positives = 60/98 (61%)
 Frame = +2

Query: 2   LKQHNGDLKGGAKTSRAGRPWICACIIQGFKDHGEACRLEXXXXXXXXXXXXXXXXXXXX 181
           LKQHNG+LKGGAK S AGRPWICACI+ GF D  EAC+ E                    
Sbjct: 52  LKQHNGELKGGAKASCAGRPWICACIVHGFNDQSEACKFESKWKSVSRKLPRKGKTVDGT 111

Query: 182 XXXXXXSLALLQHRQAALNKIQGSFDFSQLEIDWKLNP 295
                 S ALLQHRQ AL+ ++G FDF+ LEIDWKL+P
Sbjct: 112 KESVDDSHALLQHRQKALSGVKGLFDFNHLEIDWKLDP 149


>ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
           vinifera] gi|296085104|emb|CBI28599.3| unnamed protein
           product [Vitis vinifera]
          Length = 160

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/99 (53%), Positives = 62/99 (62%)
 Frame = +2

Query: 2   LKQHNGDLKGGAKTSRAGRPWICACIIQGFKDHGEACRLEXXXXXXXXXXXXXXXXXXXX 181
           LKQHNG+LKGGAK SR GRPW+CACIIQGFKD  EAC+ E                    
Sbjct: 64  LKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSEACQFE--SKWKSFSRKLPRKRNDTV 121

Query: 182 XXXXXXSLALLQHRQAALNKIQGSFDFSQLEIDWKLNPS 298
                 SL LLQHR+AALN+++GS     LEI+W+LNPS
Sbjct: 122 RQVDNDSLLLLQHREAALNRVKGSLVCDHLEINWQLNPS 160


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