BLASTX nr result

ID: Cimicifuga21_contig00025566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025566
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305956.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002525966.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_002329268.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002305956.1| predicted protein [Populus trichocarpa] gi|222848920|gb|EEE86467.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = -3

Query: 286 LFRPSEIKDLQVKASPPSNTALSVHSVPAIIQSRVPAVYT---RLISAGTGVRSDANSHM 116
           LFR ++IKDLQVK+SPP  TA  VH+ PAIIQS+ P   T    L S+G G  +D +SH 
Sbjct: 91  LFRGTDIKDLQVKSSPPVQTATPVHNDPAIIQSQYPQAATASMNLPSSGNGSLTDPSSHA 150

Query: 115 AQMEALRTTCGLPMEEYPQGFCGTLNDPSH 26
           +     R T    + +Y          PSH
Sbjct: 151 SSNGLPRPTFQGSLPQYQPDASLESWGPSH 180


>ref|XP_002525966.1| conserved hypothetical protein [Ricinus communis]
           gi|223534698|gb|EEF36390.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
 Frame = -3

Query: 286 LFRPSEIKDLQVKASPPSNTALSVHSVPAIIQSRVPAVYT---RLISAGTGVRSDANSHM 116
           LFR S+IKDLQVK+SPP  T   +H+ PAIIQS  P   T    + S+ TG   D++SH 
Sbjct: 84  LFRGSDIKDLQVKSSPPVQTTKPIHTDPAIIQSHYPQTATASMTMPSSSTGSLKDSSSHA 143

Query: 115 AQME 104
           +  E
Sbjct: 144 SPHE 147


>ref|XP_002329268.1| predicted protein [Populus trichocarpa] gi|222870722|gb|EEF07853.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -3

Query: 286 LFRPSEIKDLQVKASPPSNTALSVHSVPAIIQSRVPAVYT---RLISAGTGVRSDANSHM 116
           LFR ++IKDLQVK+ PP  TA  VH+ PAIIQS+ P   T    L S+  G  +D +SH 
Sbjct: 84  LFRGTDIKDLQVKSYPPVQTATPVHNDPAIIQSQYPQATTASMNLPSSANGPLTDPSSHA 143

Query: 115 AQMEALRTTCGLPMEEYPQG 56
           +     R T    + +Y  G
Sbjct: 144 SSNGLPRATFQGSLPQYQPG 163


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