BLASTX nr result

ID: Cimicifuga21_contig00025555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025555
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]         69   3e-10
ref|XP_002521786.1| Disease resistance protein RPP13, putative [...    62   5e-08
ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trich...    60   2e-07
ref|XP_003635649.1| PREDICTED: putative disease resistance RPP13...    59   3e-07
ref|XP_002271883.2| PREDICTED: probable disease resistance RPP8-...    58   7e-07

>gb|AEJ72566.1| putative CC-NBS-LRR protein [Malus x domestica]
          Length = 968

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/71 (46%), Positives = 52/71 (73%)
 Frame = -2

Query: 245 LPKEIGKLILLQYLNLRGTGLEKIPSFIGNLVKLQTLDLRVDDKGSRELTIHGASFMCKM 66
           LPK+IG L+ LQ+L+L+ T ++ +PS IGNL+ L+TL+L+   K S +LT+   + + KM
Sbjct: 651 LPKDIGDLVQLQFLSLKKTHIQALPSSIGNLIHLKTLNLQTISKLSWDLTVQIPNVIWKM 710

Query: 65  KQLRHLYISWW 33
           ++LRHLY+  W
Sbjct: 711 ERLRHLYLPKW 721


>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
           gi|223538999|gb|EEF40596.1| Disease resistance protein
           RPP13, putative [Ricinus communis]
          Length = 929

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -2

Query: 272 LERIKLGNG-LPKEIGKLILLQYLNLRGTGLEKIPSFIGNLVKLQTLDLRVDDKGSRELT 96
           L+ I+  NG LPK IGKLI L++L+LR T ++++P  IGNL  LQTLDL   +      T
Sbjct: 611 LDGIQGHNGKLPKGIGKLIHLRFLSLRDTDIDELPLAIGNLRYLQTLDLLTWNS-----T 665

Query: 95  IHGASFMCKMKQLRHLYI 42
           +   + +CKM++LRHLY+
Sbjct: 666 VRIPNVICKMQRLRHLYL 683


>ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837129|gb|EEE75508.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 605

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/71 (46%), Positives = 48/71 (67%)
 Frame = -2

Query: 254 GNGLPKEIGKLILLQYLNLRGTGLEKIPSFIGNLVKLQTLDLRVDDKGSRELTIHGASFM 75
           G  LPKEIGKLI L++L+LR T ++++PS IGNL  LQTLDL   +      T+   + +
Sbjct: 468 GGKLPKEIGKLIHLRFLSLRDTDIDELPSTIGNLRYLQTLDLLTWNS-----TVQIPNVV 522

Query: 74  CKMKQLRHLYI 42
            ++ +LRHLY+
Sbjct: 523 WRLHRLRHLYL 533


>ref|XP_003635649.1| PREDICTED: putative disease resistance RPP13-like protein 2-like
           [Vitis vinifera]
          Length = 782

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = -2

Query: 245 LPKEIGKLILLQYLNLRGTGLEKIPSFIGNLVKLQTLDLRVDDKGSRELTIHGASFMCKM 66
           LP+ +G+L  L+YL LR T LEK+PS I  L  LQTLD++  +  +  ++I      CK+
Sbjct: 489 LPEALGELTQLRYLGLRSTFLEKLPSSISKLRNLQTLDIKHTNIKTLPISI------CKL 542

Query: 65  KQLRHLYIS 39
           +QLRHLY+S
Sbjct: 543 QQLRHLYLS 551


>ref|XP_002271883.2| PREDICTED: probable disease resistance RPP8-like protein 2-like
           [Vitis vinifera]
          Length = 1344

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/78 (44%), Positives = 44/78 (56%)
 Frame = -2

Query: 275 SLERIKLGNGLPKEIGKLILLQYLNLRGTGLEKIPSFIGNLVKLQTLDLRVDDKGSRELT 96
           SLER+ L   L +EIG LI L+YL+ R   L   PS I NL  +QTLDLR  +  +    
Sbjct: 624 SLERLSLEEKLLREIGNLIHLKYLSFRDAKLLSFPSSIKNLGCIQTLDLRFCNDDNLVTC 683

Query: 95  IHGASFMCKMKQLRHLYI 42
                 +C MK LRHLY+
Sbjct: 684 TKIGDVICMMKLLRHLYL 701


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