BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025552
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         121   5e-26
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   121   5e-26
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   120   9e-26
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   120   9e-26
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         119   3e-25

>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = -1

Query: 297 SFNKKRYFLLFVDDFSRMMWMYFLEQKSEAFSKFVEFKALVQKQSGHRLKILRIDCGGKF 118
           S  K  YFLLF+DDFSR  W+YFL++KSE F  F +FKA V+K+SG  +K +R D GG+F
Sbjct: 39  SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEF 98

Query: 117 TSNKFLKYYTDHGIKRKLTVRYIPQ*NGVAECKNRTIVE 1
           TS +FLKY  D+GI+R+LTV   PQ NGVAE KNRTI+E
Sbjct: 99  TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 137


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = -1

Query: 297 SFNKKRYFLLFVDDFSRMMWMYFLEQKSEAFSKFVEFKALVQKQSGHRLKILRIDCGGKF 118
           S  K  YFLLF+DDFSR  W+YFL++KSE F  F +FKA V+K+SG  +K +R D GG+F
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEF 601

Query: 117 TSNKFLKYYTDHGIKRKLTVRYIPQ*NGVAECKNRTIVE 1
           TS +FLKY  D+GI+R+LTV   PQ NGVAE KNRTI+E
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 640


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = -1

Query: 297 SFNKKRYFLLFVDDFSRMMWMYFLEQKSEAFSKFVEFKALVQKQSGHRLKILRIDCGGKF 118
           S  K  YFLLF+DDFSR  W+YFL++KSE F  F +FKA V+K+SG  +K +R D GG+F
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601

Query: 117 TSNKFLKYYTDHGIKRKLTVRYIPQ*NGVAECKNRTIVE 1
           TS +FLKY  D+GI+R+LTV   PQ NGVAE KNRTI+E
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 640


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = -1

Query: 297 SFNKKRYFLLFVDDFSRMMWMYFLEQKSEAFSKFVEFKALVQKQSGHRLKILRIDCGGKF 118
           S  K  YFLLF+DDFSR  W+YFL++KSE F  F +FKA V+K+SG  +K +R D GG+F
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601

Query: 117 TSNKFLKYYTDHGIKRKLTVRYIPQ*NGVAECKNRTIVE 1
           TS +FLKY  D+GI+R+LTV   PQ NGVAE KNRTI+E
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILE 640


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/99 (59%), Positives = 74/99 (74%)
 Frame = -1

Query: 297 SFNKKRYFLLFVDDFSRMMWMYFLEQKSEAFSKFVEFKALVQKQSGHRLKILRIDCGGKF 118
           S  K  YFLLF+DDFSR  W+YFL++KSE F  F +FKA V+K+SG  +K +R D GG+F
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601

Query: 117 TSNKFLKYYTDHGIKRKLTVRYIPQ*NGVAECKNRTIVE 1
           TS +FLKY  D+GI+R+LTV   PQ NGV E KNRTI+E
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILE 640