BLASTX nr result

ID: Cimicifuga21_contig00025509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025509
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465110.1| hypothetical protein SORBIDRAFT_01g032180 [S...   234   2e-59
ref|NP_001152075.1| RING zinc finger protein-like [Zea mays] gi|...   234   3e-59
gb|EAY90535.1| hypothetical protein OsI_12137 [Oryza sativa Indi...   233   4e-59
ref|NP_001050412.1| Os03g0427100 [Oryza sativa Japonica Group] g...   233   4e-59
ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241...   232   1e-58

>ref|XP_002465110.1| hypothetical protein SORBIDRAFT_01g032180 [Sorghum bicolor]
           gi|241918964|gb|EER92108.1| hypothetical protein
           SORBIDRAFT_01g032180 [Sorghum bicolor]
          Length = 267

 Score =  234 bits (598), Expect = 2e-59
 Identities = 111/228 (48%), Positives = 148/228 (64%), Gaps = 8/228 (3%)
 Frame = +3

Query: 282 EEFLECPICWESFNVVENVPYIFWCGHTLCKTCVLSLRRAEVKLPTLPIRLPLFVSCPWC 461
           EE LECPICWESFN+VENVPY+ WCGHT+CK C+L L+ A +K+PT+PI+LP F+ CPWC
Sbjct: 40  EEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAVIKVPTVPIQLPFFICCPWC 99

Query: 462 QLLSLRLVWKGNIRFPSKNFLLLWLVESANGNRTKTXXXXXXXXXXXXXXXXXXXXATS- 638
            LLSLR+++KGN+ FP KN+ LLW+VE  NG R ++                      + 
Sbjct: 100 NLLSLRILYKGNLTFPRKNYFLLWMVEGMNGERARSRPAIHSEQQTPWLSSSSRSNGNAG 159

Query: 639 ----SREHLHEPLQSTTVSRQGVNH---LIGGWRVCAPLRKSVALLLHLTAKFPXXXXXX 797
               +R HL  P+  +  +    NH   L+   RV A LRKS++ L+HLTAKFP      
Sbjct: 160 YSNPTRRHLPPPVDMSPTNANHSNHGVPLLNAERVQASLRKSLSFLVHLTAKFPLVFIFL 219

Query: 798 XXXXXXXPASAAILVVYLLITFLFALPSIMVLYFSYPILEWLVKEMIA 941
                  PASAA+L++Y+LIT LFALPS ++LYF+YP L+WLV+E+ A
Sbjct: 220 LIVLYAIPASAAVLLLYVLITVLFALPSFLILYFAYPSLDWLVREIFA 267


>ref|NP_001152075.1| RING zinc finger protein-like [Zea mays]
           gi|195652369|gb|ACG45652.1| RING zinc finger
           protein-like [Zea mays] gi|223948587|gb|ACN28377.1|
           unknown [Zea mays] gi|413955489|gb|AFW88138.1| putative
           RING zinc finger domain superfamily protein [Zea mays]
          Length = 272

 Score =  234 bits (596), Expect = 3e-59
 Identities = 115/233 (49%), Positives = 147/233 (63%), Gaps = 13/233 (5%)
 Frame = +3

Query: 282 EEFLECPICWESFNVVENVPYIFWCGHTLCKTCVLSLRRAEVKLPTLPIRLPLFVSCPWC 461
           EE LECPICWESFN+VENVPY+ WCGHTLCK CVL L+ A +K+PT+P++LP FV CPWC
Sbjct: 40  EEGLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWAVIKVPTVPMQLPFFVCCPWC 99

Query: 462 QLLSLRLVWKGNIRFPSKNFLLLWLVESANGNRTKTXXXXXXXXXXXXXXXXXXXXATS- 638
            LLSLR+++KGN+ FP KN+ LLW+VE  NG R ++                      + 
Sbjct: 100 NLLSLRILYKGNLTFPRKNYFLLWMVEGMNGERARSRPATHSEQHTPWLSSSSRANGNAG 159

Query: 639 ----SREHLHEPLQSTTVSRQGVNH--------LIGGWRVCAPLRKSVALLLHLTAKFPX 782
               +R HL  P    T S    NH        L+   RV A LRKS++ L+HLTAKFP 
Sbjct: 160 CSNPTRRHLPLPPPVDTTSPTNANHANHGVPVPLLNAERVQASLRKSLSFLVHLTAKFPL 219

Query: 783 XXXXXXXXXXXXPASAAILVVYLLITFLFALPSIMVLYFSYPILEWLVKEMIA 941
                       PASAA+L++Y+LIT LFALPS ++LYF+YP L+WLV+E+ A
Sbjct: 220 VFIFLLIVLYAIPASAAVLLLYILITVLFALPSFLILYFAYPSLDWLVREIFA 272


>gb|EAY90535.1| hypothetical protein OsI_12137 [Oryza sativa Indica Group]
          Length = 267

 Score =  233 bits (595), Expect = 4e-59
 Identities = 111/228 (48%), Positives = 148/228 (64%), Gaps = 8/228 (3%)
 Frame = +3

Query: 282 EEFLECPICWESFNVVENVPYIFWCGHTLCKTCVLSLRRAEVKLPTLPIRLPLFVSCPWC 461
           EE LECPICWESFN+VENVPY+ WCGHT+CK C+L L+ A +K+PT+PI+LP FVSCPWC
Sbjct: 40  EEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIIKVPTVPIQLPFFVSCPWC 99

Query: 462 QLLSLRLVWKGNIRFPSKNFLLLWLVESANGNRTKTXXXXXXXXXXXXXXXXXXXXATSS 641
            LLSLR+++KGN+ FP KN+ LLW+VE  NG R ++                        
Sbjct: 100 NLLSLRIIYKGNLAFPRKNYFLLWMVEGMNGERARSRSAIHSEQQTTWLSSSSRASGNEG 159

Query: 642 -----REHLHEPLQSTTVSRQGVNH---LIGGWRVCAPLRKSVALLLHLTAKFPXXXXXX 797
                R  L  P+++ + S    NH   ++   RV A LRKS++ L+HLTAKFP      
Sbjct: 160 YSNPIRRPLPPPVETQSPSVNHANHGVPILNAERVQASLRKSLSFLVHLTAKFPLVFIFL 219

Query: 798 XXXXXXXPASAAILVVYLLITFLFALPSIMVLYFSYPILEWLVKEMIA 941
                  PASAA++++Y+LIT LFALPS ++LYF+YP L+WLV+E+ A
Sbjct: 220 LIVLYAIPASAAVMLLYILITVLFALPSFLILYFAYPSLDWLVREIFA 267


>ref|NP_001050412.1| Os03g0427100 [Oryza sativa Japonica Group]
           gi|37718893|gb|AAR01764.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708932|gb|ABF96727.1| RING
           zinc finger protein, putative, expressed [Oryza sativa
           Japonica Group] gi|108708933|gb|ABF96728.1| RING zinc
           finger protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113548883|dbj|BAF12326.1|
           Os03g0427100 [Oryza sativa Japonica Group]
           gi|125586735|gb|EAZ27399.1| hypothetical protein
           OsJ_11347 [Oryza sativa Japonica Group]
           gi|215767048|dbj|BAG99276.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 267

 Score =  233 bits (595), Expect = 4e-59
 Identities = 112/228 (49%), Positives = 148/228 (64%), Gaps = 8/228 (3%)
 Frame = +3

Query: 282 EEFLECPICWESFNVVENVPYIFWCGHTLCKTCVLSLRRAEVKLPTLPIRLPLFVSCPWC 461
           EE LECPICWESFN+VENVPY+ WCGHT+CK C+L L+ A +K+PT+PI+LP FVSCPWC
Sbjct: 40  EEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIIKVPTVPIQLPFFVSCPWC 99

Query: 462 QLLSLRLVWKGNIRFPSKNFLLLWLVESANGNRTKTXXXXXXXXXXXXXXXXXXXXATSS 641
            LLSLR+++KGN+ FP KN+ LLW+VE  NG R ++                        
Sbjct: 100 NLLSLRIIYKGNLAFPRKNYFLLWMVEGMNGERARSRSAIHSEQQTTWLSSSSRASGNEG 159

Query: 642 -----REHLHEPLQSTTVSRQGVNH---LIGGWRVCAPLRKSVALLLHLTAKFPXXXXXX 797
                R  L  P+++ + S    NH   ++   RV A LRKS++ L+HLTAKFP      
Sbjct: 160 YSNPIRRPLPPPVETQSPSVNHANHGVPILNAERVQALLRKSLSFLVHLTAKFPLVFIFL 219

Query: 798 XXXXXXXPASAAILVVYLLITFLFALPSIMVLYFSYPILEWLVKEMIA 941
                  PASAA+L++Y+LIT LFALPS ++LYF+YP L+WLV+E+ A
Sbjct: 220 LIVLYAIPASAAVLLLYILITVLFALPSFLILYFAYPSLDWLVREIFA 267


>ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
          Length = 268

 Score =  232 bits (591), Expect = 1e-58
 Identities = 116/227 (51%), Positives = 141/227 (62%), Gaps = 8/227 (3%)
 Frame = +3

Query: 282 EEFLECPICWESFNVVENVPYIFWCGHTLCKTCVLSLRRAEVKLPTLPIRLPLFVSCPWC 461
           EE LECPICWESFN+VENVPY+ WCGHTLCK CVL L+ A VK PTLPI+LP F+SCPWC
Sbjct: 41  EEGLECPICWESFNIVENVPYVLWCGHTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWC 100

Query: 462 QLLSLRLVWKGNIRFPSKNFLLLWLVESANGNRTKTXXXXXXXXXXXXXXXXXXXXATSS 641
            LLS RLV+KGN+ FP KNF LLW+VES NG+R K+                       S
Sbjct: 101 NLLSFRLVYKGNLTFPRKNFFLLWMVESMNGDRGKSHSSFCDHQPGWSSNRNLIIGNQGS 160

Query: 642 R--------EHLHEPLQSTTVSRQGVNHLIGGWRVCAPLRKSVALLLHLTAKFPXXXXXX 797
                     HL E  +S       +N  +   R+   +RKS+   +HLTAKFP      
Sbjct: 161 HVNHRRPPYSHLPEQSESNHDGGHLINRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIFL 220

Query: 798 XXXXXXXPASAAILVVYLLITFLFALPSIMVLYFSYPILEWLVKEMI 938
                  PASAAIL +Y+LIT LFALPS ++LYF+YP L+WLV+E+I
Sbjct: 221 LIVLYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWLVREII 267


Top