BLASTX nr result
ID: Cimicifuga21_contig00025298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00025298
(616 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 285 5e-75
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera] 241 6e-62
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 233 3e-59
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846... 232 5e-59
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 231 6e-59
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 285 bits (729), Expect = 5e-75
Identities = 135/205 (65%), Positives = 167/205 (81%)
Frame = +1
Query: 1 LLQRFKMDGAKPCKTPISSICKLDNSCGELLPDTSEYKSLVGALQYITWTRPNIAYAVNQ 180
LL++ M GAKPC TP+S+ KLD+S G LL D + Y+S VGALQY+TWTRP++A+AVNQ
Sbjct: 1400 LLKKTDMLGAKPCATPVST-SKLDHS-GTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQ 1457
Query: 181 VCQYLHQPRTTHLQAAKRILRFLKGSIDCGLRFTKGNSLLTAYSDADWAGSPIDRRSITG 360
VCQY+H P+T HLQA KRILR+LKG++D GL FTKG+ LTA+SDADWAG P+DRRS +G
Sbjct: 1458 VCQYMHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRSTSG 1517
Query: 361 FCLYYGQNLISWCAKKQPTVSRSSTEAEYRSLAQTATEIYWVCQLLKDLKVPLSNPPLIW 540
+C++ G NLISW AKKQ TV+RSSTEAEYRSLA TA EI WVC++L D+ PL P+I+
Sbjct: 1518 YCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIY 1577
Query: 541 CDNLGAISLASNPVFHARTKHIEVD 615
CDN I+LA NPVFHARTKH+E+D
Sbjct: 1578 CDNKSVIALAFNPVFHARTKHVEID 1602
>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
Length = 879
Score = 241 bits (616), Expect = 6e-62
Identities = 118/207 (57%), Positives = 150/207 (72%), Gaps = 2/207 (0%)
Frame = +1
Query: 1 LLQRFKMDGAKPCKTPISSICKLDNSCGELLPDT--SEYKSLVGALQYITWTRPNIAYAV 174
LLQR KM GAKP +P ++ KL GE L + +EY+ GALQY T RP+IA++V
Sbjct: 658 LLQRTKMAGAKPASSPCTTGLKLSTHVGEPLTASQITEYRQTXGALQYCTLNRPDIAFSV 717
Query: 175 NQVCQYLHQPRTTHLQAAKRILRFLKGSIDCGLRFTKGNSLLTAYSDADWAGSPIDRRSI 354
NQ+CQ++H P + H AKR+L +LKG+ID GL +TKG L A+ D+DWAG+P DRRS
Sbjct: 718 NQLCQHMHCPNSVHWTTAKRVLCYLKGTIDLGLWYTKGEQTLQAFCDSDWAGNPDDRRST 777
Query: 355 TGFCLYYGQNLISWCAKKQPTVSRSSTEAEYRSLAQTATEIYWVCQLLKDLKVPLSNPPL 534
TG+ +++G LISW AKKQ V+RSSTEAEYR+L T E+YW+ LLK+L + L P
Sbjct: 778 TGYGVFFGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWIRMLLKELHISLPTAPT 837
Query: 535 IWCDNLGAISLASNPVFHARTKHIEVD 615
IWCDN GA++LASNPVFHARTKHIEVD
Sbjct: 838 IWCDNSGALALASNPVFHARTKHIEVD 864
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 233 bits (593), Expect = 3e-59
Identities = 117/208 (56%), Positives = 154/208 (74%), Gaps = 3/208 (1%)
Frame = +1
Query: 1 LLQRFKMDGAKPCKTPISSICKLDNSCGELL--PDTSEYKSLVGALQYITWTRPNIAYAV 174
LL+R M KP TP+S+ KL + G LL D+++Y+S+VGALQY+T TRP+I++++
Sbjct: 559 LLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSI 618
Query: 175 NQVCQYLHQPRTTHLQAAKRILRFLKGSIDCGLRFTKGNSLLTA-YSDADWAGSPIDRRS 351
N+VCQ+LH P TTH A KRILR++K ++D GL+F + SLL + +SDADWAGSP DRRS
Sbjct: 619 NKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRS 678
Query: 352 ITGFCLYYGQNLISWCAKKQPTVSRSSTEAEYRSLAQTATEIYWVCQLLKDLKVPLSNPP 531
GF ++ G NL+SW A+KQ TVSRSSTEAEY++LA EI WV LL++L V
Sbjct: 679 TGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAA 738
Query: 532 LIWCDNLGAISLASNPVFHARTKHIEVD 615
+WCDNLGA L++NP+FHARTKHIEVD
Sbjct: 739 KLWCDNLGAKYLSANPIFHARTKHIEVD 766
>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
distachyon]
Length = 989
Score = 232 bits (591), Expect = 5e-59
Identities = 113/208 (54%), Positives = 149/208 (71%), Gaps = 3/208 (1%)
Frame = +1
Query: 1 LLQRFKMDGAKPCKTPISSICKLDNSCGELL--PDTSEYKSLVGALQYITWTRPNIAYAV 174
LL R M+ +P TP+S+ KL GE L D+ +Y+SL+G LQY+T TRP++++AV
Sbjct: 730 LLHRANMEQCRPVTTPMSTSDKLTRDLGEPLGLEDSFKYRSLIGGLQYLTLTRPDLSFAV 789
Query: 175 NQVCQYLHQPRTTHLQAAKRILRFLKGSIDCGLRFTKGNSL-LTAYSDADWAGSPIDRRS 351
N+VCQYL QP T H + KRILRF+KG + GLRF + +S L ++DADWAG DRRS
Sbjct: 790 NKVCQYLSQPTTAHYEVVKRILRFVKGIVSTGLRFQRSSSTRLGIFTDADWAGCSDDRRS 849
Query: 352 ITGFCLYYGQNLISWCAKKQPTVSRSSTEAEYRSLAQTATEIYWVCQLLKDLKVPLSNPP 531
GF ++ G NL+SW ++KQPTVSRSSTEAEY+ LA E W+ +LK+L V S PP
Sbjct: 850 TGGFAVFLGPNLVSWSSRKQPTVSRSSTEAEYKVLANGTAEAIWIQSVLKELGVYQSRPP 909
Query: 532 LIWCDNLGAISLASNPVFHARTKHIEVD 615
++WCDN+GA L++NPVFHARTKHIE+D
Sbjct: 910 VLWCDNIGATYLSANPVFHARTKHIEID 937
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 231 bits (590), Expect = 6e-59
Identities = 119/217 (54%), Positives = 153/217 (70%), Gaps = 12/217 (5%)
Frame = +1
Query: 1 LLQRFKMDGAKPCKTPISSICKLDNSCGELL--PDTSEYKSLVGALQYITWTRPNIAYAV 174
LL+R M KP TP+S+ KL G+ L D ++Y+S+VGALQY+T TRP+I+Y+V
Sbjct: 636 LLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGALQYLTLTRPDISYSV 695
Query: 175 NQVCQYLHQPRTTHLQAAKRILRFLKGSIDCGLRFTKGNS-LLTAYSDADWAGSP----- 336
N+VCQ+L P T H A KRILR+LKG++D GL+ K +S L++A+SDADWAGS
Sbjct: 696 NKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRS 755
Query: 337 ----IDRRSITGFCLYYGQNLISWCAKKQPTVSRSSTEAEYRSLAQTATEIYWVCQLLKD 504
DRRS GF +++G NLISW A+KQ TVSRSSTEAEY++LA A EI WV +LL +
Sbjct: 756 TGGFADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTE 815
Query: 505 LKVPLSNPPLIWCDNLGAISLASNPVFHARTKHIEVD 615
L + N +WCDNLGA + +NPVFHARTKHIEVD
Sbjct: 816 LGILHPNAARLWCDNLGATYMTANPVFHARTKHIEVD 852