BLASTX nr result

ID: Cimicifuga21_contig00024980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024980
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF26445.1| vacuolar H+-ATPase B subunit [Nicotiana tabacum]        85   5e-15
gb|AAC36485.1| nucleotide-binding subunit of vacuolar ATPase [Ar...    84   9e-15
ref|NP_177729.1| V-type proton ATPase subunit B1 [Arabidopsis th...    84   2e-14
gb|AAF26763.1|AC007396_12 T4O12.24 [Arabidopsis thaliana]              84   2e-14
ref|XP_002887623.1| predicted protein [Arabidopsis lyrata subsp....    84   2e-14

>gb|AAF26445.1| vacuolar H+-ATPase B subunit [Nicotiana tabacum]
          Length = 486

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/51 (82%), Positives = 48/51 (94%), Gaps = 2/51 (3%)
 Frame = +2

Query: 275 MGMAPT--EVEEGSLEIGVEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLG 421
           MG+AP   E+EEG+LE+G+EYRTVSGVAGPLVIL+KVKGPKYQEIVNIRLG
Sbjct: 1   MGVAPNNIEMEEGNLEVGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLG 51


>gb|AAC36485.1| nucleotide-binding subunit of vacuolar ATPase [Arabidopsis
           thaliana]
          Length = 492

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +2

Query: 266 NLKMGMAPTEVEEGSLEIGVEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLG 421
           ++ MG    ++EEG+LEIG+EYRTVSGVAGPLVIL+KVKGPKYQEIVNIRLG
Sbjct: 4   SVNMGTNDLDIEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLG 55


>ref|NP_177729.1| V-type proton ATPase subunit B1 [Arabidopsis thaliana]
           gi|27735259|sp|P11574.2|VATB1_ARATH RecName: Full=V-type
           proton ATPase subunit B1; Short=V-ATPase subunit B1;
           AltName: Full=V-ATPase 57 kDa subunit; AltName:
           Full=Vacuolar H(+)-ATPase subunit B isoform 1; AltName:
           Full=Vacuolar proton pump subunit B1
           gi|20453110|gb|AAM19797.1| At1g76030/T4O12_24
           [Arabidopsis thaliana] gi|21928027|gb|AAM78042.1|
           At1g76030/T4O12_24 [Arabidopsis thaliana]
           gi|332197665|gb|AEE35786.1| V-type proton ATPase subunit
           B1 [Arabidopsis thaliana]
          Length = 486

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +2

Query: 275 MGMAPTEVEEGSLEIGVEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLG 421
           MG    ++EEG+LEIG+EYRTVSGVAGPLVIL+KVKGPKYQEIVNIRLG
Sbjct: 1   MGTNDLDIEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLG 49


>gb|AAF26763.1|AC007396_12 T4O12.24 [Arabidopsis thaliana]
          Length = 520

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +2

Query: 275 MGMAPTEVEEGSLEIGVEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLG 421
           MG    ++EEG+LEIG+EYRTVSGVAGPLVIL+KVKGPKYQEIVNIRLG
Sbjct: 1   MGTNDLDIEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLG 49


>ref|XP_002887623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333464|gb|EFH63882.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 486

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = +2

Query: 275 MGMAPTEVEEGSLEIGVEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLG 421
           MG    ++EEG+LEIG+EYRTVSGVAGPLVIL+KVKGPKYQEIVNIRLG
Sbjct: 1   MGTNDLDIEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLG 49


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