BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024977
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...    93   4e-17
ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...    88   9e-16
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...    80   3e-13
ref|XP_003579807.1| PREDICTED: nuclear speckle splicing regulato...    78   1e-12
ref|XP_002880900.1| hypothetical protein ARALYDRAFT_481627 [Arab...    75   1e-11

>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536956|gb|EEF38594.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 327

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 30/151 (19%)
 Frame = -2

Query: 583 KDDVTKKGDISEFYFNLSKNVAFGANVSESGRQVS----KKDEK------GITAPTGQAL 434
           KDDVTKK D+S+FYFNL KNVAFGA   +S +Q      +K EK      G T+  G+  
Sbjct: 177 KDDVTKKSDLSDFYFNLGKNVAFGAKEIDSRKQEKQTELRKSEKLDDEAAGSTSGRGRP- 235

Query: 433 LPWSES--------------------SPSNSGEMVVAETSLDSEIDITRQGNLVAEQPSA 314
           LP S+S                     P  + E        + ++D + Q N   E+P A
Sbjct: 236 LPDSKSIMESSRVNEEHHDGTSPVPILPRRNSESSDVNPVSERKVDTSVQENTATEEPLA 295

Query: 313 DEKKQDDHHKRKEDALAAAKERFLARKRAKE 221
           ++ KQ DHHKR ED +AAAKERFLARK+AK+
Sbjct: 296 NQPKQ-DHHKRNEDTVAAAKERFLARKKAKQ 325


>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
           vinifera] gi|147866225|emb|CAN79937.1| hypothetical
           protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score = 88.2 bits (217), Expect = 9e-16
 Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
 Frame = -2

Query: 583 KDDVTKKGDISEFYFNLSKNVAFGANVSESGRQVSKKD----EKGITAPT----GQALLP 428
           KDDVTKK D+S+FY+NLSKNVAFG   ++  ++  K D    EKG ++         +  
Sbjct: 166 KDDVTKKSDLSDFYYNLSKNVAFGGIEAKLRKREEKVDADTSEKGSSSTNTHTDSSVINE 225

Query: 427 WSESSPSNSGEMVVAETSLDSEIDI------TRQGNLVAEQPSADEKKQDDHHKRKEDAL 266
             E    + G+           +DI      + Q   +AE+  A + K D HHKR EDA+
Sbjct: 226 GHEGHEGHEGKTSTPSKESSQSLDIKPVSDASAQEKALAEETLAQQPKSD-HHKRSEDAV 284

Query: 265 AAAKERFLARKRAKE 221
           AAAKERFLARKRAK+
Sbjct: 285 AAAKERFLARKRAKQ 299


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
           PREDICTED: nuclear speckle splicing regulatory protein
           1-like [Cucumis sativus]
          Length = 322

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 36/157 (22%)
 Frame = -2

Query: 583 KDDVTKKGDISEFYFNLSKNVAFGANVS-----------------ESGRQVSKKDEKGIT 455
           K+DVTKK D+S+FYF+L KNVA+GA  +                 ++   + +K E+   
Sbjct: 165 KEDVTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCN 224

Query: 454 APTGQALLPWSESSPSNSGEMVVAETSLDSEIDI---TRQGNL-------------VAEQ 323
             T    L  + + PS S + +     L+  +     T   N+             V EQ
Sbjct: 225 GDTFNDHLLQNSNLPSCSEKTIEEHPHLEERLPFSNKTTPSNIEGTSPPTLHDKTPVQEQ 284

Query: 322 PSADEKKQ---DDHHKRKEDALAAAKERFLARKRAKE 221
           P  ++ +Q    DHHKR EDA+AAAKERFLARKRAKE
Sbjct: 285 PKHEQSEQPPKSDHHKRNEDAVAAAKERFLARKRAKE 321


>ref|XP_003579807.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Brachypodium distachyon]
          Length = 310

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 58/150 (38%), Positives = 75/150 (50%), Gaps = 29/150 (19%)
 Frame = -2

Query: 583 KDDVTKKGDISEFYFNLSKNVAFGANVSESGRQV--------------SKKDEKGITAPT 446
           KDDVTKK D+S+FYF L+KNVAFGA   +   QV              SK D +G    +
Sbjct: 166 KDDVTKKKDLSDFYFGLAKNVAFGARTHDGTEQVEPEKLDNNVEDIRTSKSDAEG----S 221

Query: 445 GQALLPWSESS--------------PSNSGEM-VVAETSLDSEIDITRQGNLVAEQPSAD 311
           G++     ESS              P+ +G    +A TS + + D+       A Q    
Sbjct: 222 GRSPKRMRESSVGSEKAHESRSVEEPATTGSRDSMAATSTEKDADVAP----TASQVPQP 277

Query: 310 EKKQDDHHKRKEDALAAAKERFLARKRAKE 221
               D+H+KR  DALAAA+ER LARKRAKE
Sbjct: 278 APVTDEHYKRSTDALAAARERALARKRAKE 307


>ref|XP_002880900.1| hypothetical protein ARALYDRAFT_481627 [Arabidopsis lyrata subsp.
           lyrata] gi|297326739|gb|EFH57159.1| hypothetical protein
           ARALYDRAFT_481627 [Arabidopsis lyrata subsp. lyrata]
          Length = 325

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 40/160 (25%)
 Frame = -2

Query: 583 KDDVTKKGDISEFYFNLSKNVAFGANVSESG--------------------------RQV 482
           +DDVTKK D+S+FYFN+ KNVAFGA   E+                           R+ 
Sbjct: 165 RDDVTKKKDLSDFYFNIGKNVAFGARDIEAKEVERLEEQRKAEKLEEQRRAEKLEELRKE 224

Query: 481 SKKDEKGITAPTGQALLPWSESSPSN--------------SGEMVVAETSLDSEIDITRQ 344
             ++EK   +P  +  LP  E SP +                E  V+E  + S  D T +
Sbjct: 225 ETREEKKRKSPEKE--LPEKELSPDSRDFGSSRSKSLEPQEAEQAVSEKKMGS--DGTEE 280

Query: 343 GNLVAEQPSADEKKQDDHHKRKEDALAAAKERFLARKRAK 224
            +   ++ + +  K  + HKR+EDA+AAAKERFLARK+AK
Sbjct: 281 RDSSIKEAAKEVPKAVNDHKRREDAIAAAKERFLARKKAK 320