BLASTX nr result

ID: Cimicifuga21_contig00024966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024966
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309593.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002324837.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002284900.1| PREDICTED: transcriptional corepressor LEUNI...    87   2e-15
emb|CAN74631.1| hypothetical protein VITISV_024165 [Vitis vinifera]    87   2e-15
ref|XP_003633134.1| PREDICTED: transcriptional corepressor LEUNI...    81   8e-14

>ref|XP_002309593.1| predicted protein [Populus trichocarpa] gi|222855569|gb|EEE93116.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 84  EGGHHLNGTANGLVGNDPLLRQNTSTANALATKMYEERLKLPHQRDPLEDTAMK 245
           +G H LNG ANGLVGNDPL+RQNT+TANA+ATKMYEE+LKLP +RD L D AMK
Sbjct: 174 DGAHLLNGAANGLVGNDPLMRQNTATANAMATKMYEEKLKLPMERDSLTDAAMK 227


>ref|XP_002324837.1| predicted protein [Populus trichocarpa] gi|222866271|gb|EEF03402.1|
           predicted protein [Populus trichocarpa]
          Length = 955

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = +3

Query: 84  EGGHHLNGTANGLVGNDPLLRQNTSTANALATKMYEERLKLPHQRDPLEDTAMK 245
           +G H LNGT NGLVGNDPL+RQN +TANA+ATKMYEE+LKLP +RD L D AMK
Sbjct: 201 DGAHLLNGTTNGLVGNDPLMRQNAATANAMATKMYEEKLKLPMERDSLADAAMK 254


>ref|XP_002284900.1| PREDICTED: transcriptional corepressor LEUNIG-like [Vitis vinifera]
          Length = 910

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = +3

Query: 84  EGGHHLNGTANGLVGNDPLLRQNTSTANALATKMYEERLKLPHQRDPLEDTAMK 245
           +G H LNGT NGLVGNDPL+R N +TANALATKMYEERLKLP QRD L+D  MK
Sbjct: 158 DGAHLLNGTTNGLVGNDPLMRTNPATANALATKMYEERLKLPIQRDSLDDATMK 211


>emb|CAN74631.1| hypothetical protein VITISV_024165 [Vitis vinifera]
          Length = 690

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = +3

Query: 84  EGGHHLNGTANGLVGNDPLLRQNTSTANALATKMYEERLKLPHQRDPLEDTAMK 245
           +G H LNGT NGLVGNDPL+R N +TANALATKMYEERLKLP QRD L+D  MK
Sbjct: 199 DGAHLLNGTTNGLVGNDPLMRTNPATANALATKMYEERLKLPIQRDSLDDATMK 252


>ref|XP_003633134.1| PREDICTED: transcriptional corepressor LEUNIG-like [Vitis vinifera]
          Length = 883

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/54 (72%), Positives = 44/54 (81%)
 Frame = +3

Query: 84  EGGHHLNGTANGLVGNDPLLRQNTSTANALATKMYEERLKLPHQRDPLEDTAMK 245
           +G   LNG+ NGLV ND L+RQN +TAN LATKMYEERLKLP QRDPL+D AMK
Sbjct: 143 DGTQILNGSGNGLVSNDALMRQNPATANTLATKMYEERLKLPLQRDPLDDAAMK 196


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