BLASTX nr result

ID: Cimicifuga21_contig00024913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024913
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28471.1| polyprotein, partial [Ananas comosus]                   70   1e-09
gb|ACB28470.1| polyprotein, partial [Ananas comosus]                   70   1e-09
gb|ACB28469.1| polyprotein, partial [Ananas comosus]                   68   4e-09
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]       64   5e-08
ref|XP_002339482.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06

>gb|ACB28471.1| polyprotein, partial [Ananas comosus]
          Length = 546

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +3

Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875
           WG VLKA++ N Y D   EK+CGY SG +   + K+SS + E+L +IYA++ FKL + NK
Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228

Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968
               +RTD   I +    K    S+ RRW NF
Sbjct: 229 QEITIRTDCEAITKFSHKKDEKASSRRRWINF 260


>gb|ACB28470.1| polyprotein, partial [Ananas comosus]
          Length = 551

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +3

Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875
           WG VLKA++ N Y D   EK+CGY SG +   + K+SS + E+L +IYA++ FKL + NK
Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228

Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968
               +RTD   I +    K    S+ RRW NF
Sbjct: 229 QEITIRTDCEAITKFSHKKDEKASSRRRWINF 260


>gb|ACB28469.1| polyprotein, partial [Ananas comosus]
          Length = 630

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
 Frame = +3

Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875
           WG VLKA++ N Y D   EK+CGY SG +   + K+SS + E+L +IYA++ FKL + NK
Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228

Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968
               +RTD   I +         S+ RRW NF
Sbjct: 229 HEITIRTDCEAITKFSHKNDEKASSRRRWINF 260


>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
 Frame = +3

Query: 705  WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875
            WG +L  K  N Y +   EK+C Y SGNF       +S ++EI  +I AI  FKL L NK
Sbjct: 1228 WGAILITK-PNEYAEKDTEKICAYASGNFK--NNNWTSLDMEIQGVINAINTFKLYL-NK 1283

Query: 876  VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968
             F LRTD  NI + +  + +   N++RW NF
Sbjct: 1284 KFTLRTDCENIVKFMKNENSRKHNSKRWLNF 1314


>ref|XP_002339482.1| predicted protein [Populus trichocarpa] gi|222875218|gb|EEF12349.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = +3

Query: 705 WGGVLKAKNKNSYEDEKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNKVFD 884
           WGG+LK+K  +  E   +CGY SG F PA++   S   EIL +I  I+ F++ L    F 
Sbjct: 171 WGGILKSKQSDGLE--LICGYASGTFKPAEKNYHSNEKEILALINTIKRFQVFLIPVQFT 228

Query: 885 LRTDAHNIKRALDT 926
            RTD  N+   L T
Sbjct: 229 ARTDNKNVFYFLHT 242


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