BLASTX nr result
ID: Cimicifuga21_contig00024913
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00024913 (970 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACB28471.1| polyprotein, partial [Ananas comosus] 70 1e-09 gb|ACB28470.1| polyprotein, partial [Ananas comosus] 70 1e-09 gb|ACB28469.1| polyprotein, partial [Ananas comosus] 68 4e-09 gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] 64 5e-08 ref|XP_002339482.1| predicted protein [Populus trichocarpa] gi|2... 57 5e-06 >gb|ACB28471.1| polyprotein, partial [Ananas comosus] Length = 546 Score = 69.7 bits (169), Expect = 1e-09 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Frame = +3 Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875 WG VLKA++ N Y D EK+CGY SG + + K+SS + E+L +IYA++ FKL + NK Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228 Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968 +RTD I + K S+ RRW NF Sbjct: 229 QEITIRTDCEAITKFSHKKDEKASSRRRWINF 260 >gb|ACB28470.1| polyprotein, partial [Ananas comosus] Length = 551 Score = 69.7 bits (169), Expect = 1e-09 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Frame = +3 Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875 WG VLKA++ N Y D EK+CGY SG + + K+SS + E+L +IYA++ FKL + NK Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228 Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968 +RTD I + K S+ RRW NF Sbjct: 229 QEITIRTDCEAITKFSHKKDEKASSRRRWINF 260 >gb|ACB28469.1| polyprotein, partial [Ananas comosus] Length = 630 Score = 67.8 bits (164), Expect = 4e-09 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 4/92 (4%) Frame = +3 Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875 WG VLKA++ N Y D EK+CGY SG + + K+SS + E+L +IYA++ FKL + NK Sbjct: 171 WGAVLKARS-NKYSDTKEEKLCGYASGKYRE-RGKISSIDAELLAVIYALDAFKLNVINK 228 Query: 876 -VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968 +RTD I + S+ RRW NF Sbjct: 229 HEITIRTDCEAITKFSHKNDEKASSRRRWINF 260 >gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] Length = 2027 Score = 63.9 bits (154), Expect = 5e-08 Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Frame = +3 Query: 705 WGGVLKAKNKNSYED---EKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNK 875 WG +L K N Y + EK+C Y SGNF +S ++EI +I AI FKL L NK Sbjct: 1228 WGAILITK-PNEYAEKDTEKICAYASGNFK--NNNWTSLDMEIQGVINAINTFKLYL-NK 1283 Query: 876 VFDLRTDAHNIKRALDTKTATTSNNRRWTNF 968 F LRTD NI + + + + N++RW NF Sbjct: 1284 KFTLRTDCENIVKFMKNENSRKHNSKRWLNF 1314 >ref|XP_002339482.1| predicted protein [Populus trichocarpa] gi|222875218|gb|EEF12349.1| predicted protein [Populus trichocarpa] Length = 294 Score = 57.4 bits (137), Expect = 5e-06 Identities = 30/74 (40%), Positives = 41/74 (55%) Frame = +3 Query: 705 WGGVLKAKNKNSYEDEKMCGYCSGNFNPAQQKLSSTNLEILEIIYAIEHFKLILTNKVFD 884 WGG+LK+K + E +CGY SG F PA++ S EIL +I I+ F++ L F Sbjct: 171 WGGILKSKQSDGLE--LICGYASGTFKPAEKNYHSNEKEILALINTIKRFQVFLIPVQFT 228 Query: 885 LRTDAHNIKRALDT 926 RTD N+ L T Sbjct: 229 ARTDNKNVFYFLHT 242