BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024910
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
emb|CBI22491.3| unnamed protein product [Vitis vinifera]              184   5e-45
ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44

>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/112 (81%), Positives = 103/112 (91%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           GRCKPNELTY SLLHAYANGKE++RM  L+EEIYSGII+P AVLLKTLVLVYSKSDLL E
Sbjct: 565 GRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTE 624

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           TERAFLELR  G+SPDI+TLNAMVSIYG+R+MV+K  EILNF+K++GFTPSL
Sbjct: 625 TERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSL 676



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYAN-GKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIET 154
           C+P  +TY+ +L+ Y   G    ++  L + + S  + P      TL+    +  L  E 
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 153 ERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
              F E++  G+SPD  T NA++ +YGK +   +A E+L  M+ +GF PS+
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/107 (25%), Positives = 57/107 (53%)
 Frame = -2

Query: 324 PNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIETERA 145
           P+  TY+SL++ Y+  +  ++  D+  EI +  +KP  +   T++  Y ++  + E  R 
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733

Query: 144 FLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPS 4
           F E++  G +PD+ T N  ++ Y    M  +A +++ +M +    P+
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPN 780



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/110 (29%), Positives = 53/110 (48%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIETE 151
           C+PN  T+++L+  + N      M  + EEI      P  V   TL+ V+ ++ +  E  
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486

Query: 150 RAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
             F E++R G+ P+  T N ++S Y +     +A  I   M + G TP L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDL 536


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/112 (81%), Positives = 103/112 (91%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           GRCKPNELTY SLLHAYANGKE++RM  L+EEIYSGII+P AVLLKTLVLVYSKSDLL E
Sbjct: 565 GRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTE 624

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           TERAFLELR  G+SPDI+TLNAMVSIYG+R+MV+K  EILNF+K++GFTPSL
Sbjct: 625 TERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSL 676



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYAN-GKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIET 154
           C+P  +TY+ +L+ Y   G    ++  L + + S  + P      TL+    +  L  E 
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 153 ERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
              F E++  G+SPD  T NA++ +YGK +   +A E+L  M+ +GF PS+
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/107 (26%), Positives = 58/107 (54%)
 Frame = -2

Query: 324 PNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIETERA 145
           P+  TY+SL++ Y+  +  ++  D+  EI +  +KP  +   T++  Y ++  + E  R 
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733

Query: 144 FLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPS 4
           F E++  G +PD+ T N  ++ Y    M  +A +++ +M + G  P+
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPN 780



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/110 (29%), Positives = 53/110 (48%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIETE 151
           C+PN  T+++L+  + N      M  + EEI      P  V   TL+ V+ ++ +  E  
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486

Query: 150 RAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
             F E++R G+ P+  T N ++S Y +     +A  I   M + G TP L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDL 536


>emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/112 (83%), Positives = 102/112 (91%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           GRCKPNELTY SLLHAYANGKEI+RMC L+EEIYSGII+P AVLLKTLVLV SK DLL+E
Sbjct: 273 GRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLME 332

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           TERAFLELR+ G+SPDI+TLNAMVSIYG+RQMVAKA EIL+ MK  GFTPSL
Sbjct: 333 TERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSL 384



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/111 (26%), Positives = 58/111 (52%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           G   P+  TY+SL++ Y+     +R  ++  EI +  I+P  +   T++  Y ++  + +
Sbjct: 378 GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRD 437

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPS 4
             R   E+R +G +PDI T N  ++ Y    M  +A +++ +M + G  P+
Sbjct: 438 ASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 488


>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/112 (83%), Positives = 102/112 (91%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           GRCKPNELTY SLLHAYANGKEI+RMC L+EEIYSGII+P AVLLKTLVLV SK DLL+E
Sbjct: 545 GRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLME 604

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           TERAFLELR+ G+SPDI+TLNAMVSIYG+RQMVAKA EIL+ MK  GFTPSL
Sbjct: 605 TERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSL 656



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYAN-GKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIET 154
           CKP  +TY+ +L+ Y   G    +M  L + + S  I P +    TL+    + +L  E 
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEA 290

Query: 153 ERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
                E++  G+SPD  T NA++ +YGK +   +A E+L  M+  G  PS+
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSI 341



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/111 (26%), Positives = 58/111 (52%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           G   P+  TY+SL++ Y+     +R  ++  EI +  I+P  +   T++  Y ++  + +
Sbjct: 650 GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRD 709

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPS 4
             R   E+R +G +PDI T N  ++ Y    M  +A +++ +M + G  P+
Sbjct: 710 ASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 760


>ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/112 (82%), Positives = 101/112 (90%)
 Frame = -2

Query: 336 GRCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIE 157
           GRCKPNEL+YSSLLHAYANGKEI+RM   +EEIYSG ++ HAVLLKTLVLV SKSDLLIE
Sbjct: 538 GRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIE 597

Query: 156 TERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           TERAFLELRR G SPDI+TLNAM+SIYG++QMVAKA EILNFM ET FTPSL
Sbjct: 598 TERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSL 649



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/109 (25%), Positives = 57/109 (52%)
 Frame = -2

Query: 333 RCKPNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIET 154
           R  P+  TY+SL++ Y+  +  Q+  ++  E+    +KP  +   T++  Y ++  + E 
Sbjct: 644 RFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEA 703

Query: 153 ERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTP 7
            R F E++ +   PD+ T N  ++ Y    M A+A +++ +M + G  P
Sbjct: 704 SRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKP 752



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/108 (29%), Positives = 56/108 (51%)
 Frame = -2

Query: 324 PNELTYSSLLHAYANGKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIETERA 145
           P  +TY+SL+ AYA G  ++   DL  ++    IKP      TL+  + K+       + 
Sbjct: 332 PTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQV 391

Query: 144 FLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPSL 1
           FLE+R  G  P+I T NA++ ++G R   A+  ++ + +K    +P +
Sbjct: 392 FLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDI 439



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
 Frame = -2

Query: 330 CKPNELTYSSLLHAYAN-GKEIQRMCDLSEEIYSGIIKPHAVLLKTLVLVYSKSDLLIET 154
           C P  +TY+ +L+ Y   G     +  L E + S  + P      TL+    +  L  E 
Sbjct: 224 CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEA 283

Query: 153 ERAFLELRRNGYSPDISTLNAMVSIYGKRQMVAKATEILNFMKETGFTPS 4
              F +++  G++PD  T NA++ ++GK +   +A ++L  M+  GF+P+
Sbjct: 284 VHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPT 333